Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2382 |
Symbol | |
ID | 1221228 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2587325 |
End bp | 2587867 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238782 |
Product | lipoprotein |
Protein accession | NP_520503 |
Protein GI | 17547101 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.335276 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0101048 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTTAC TGGCATCGCT GCTCGGCCTG TTCGGCTGCG ATCAGCAGAA GGTGGATCAG GCCGTCGATC GCGCGGGCGA GGCGGCCAAG CGCGCCTGGC AGTCGGCCAA GCCCGACAAT CTGCTGTTCA AGGGCATTCA GGCAGGCCAA TCGACCGAGG CCGACGTGCG CGCCACCGCT GGCCAGCCCG ACATGATCTG GGAGAACGAA GACGGCACGC GCCAGCTGGA GTATCCGCGC GGGCCGGAGG GCACCTCCAC GTGGCTGGTG ACGATCGGGC CGGACGGCCG CGTGCGCGGC ATCGACCAAC TGCTGTCGGC TGACAATTTC GGTCGTGTGC GCCCAGGCCA GACGCGCGAC GACGTCCGCC GCCTGCTCGG CAAGCCGACC AAGGTGGAAG CGTTTCGTCT GAAGCAGGAA GAGGTGTGGG GCTACCGCTG GATGGAAAAC CCGACCGAGC GGGCCTTCTT CAACGTGCAT TTCGGGCCGG ACGGCCGCGT CACCACGACA TCGCGCAGCG ACAACCGCCT GAACGGCGGC TGA
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Protein sequence | MGLLASLLGL FGCDQQKVDQ AVDRAGEAAK RAWQSAKPDN LLFKGIQAGQ STEADVRATA GQPDMIWENE DGTRQLEYPR GPEGTSTWLV TIGPDGRVRG IDQLLSADNF GRVRPGQTRD DVRRLLGKPT KVEAFRLKQE EVWGYRWMEN PTERAFFNVH FGPDGRVTTT SRSDNRLNGG
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