Gene RSc2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2375 
Symbol 
ID1221221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2578960 
End bp2579631 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content72% 
IMG OID637238775 
Producthypothetical protein 
Protein accessionNP_520496 
Protein GI17547094 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00953085 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCGACG CTCAGCCCCT GCAGTTCCAG CTTGCCGCCA CGCCCGCCGA CAGCGCGGAG 
GATCTCGCCC GCGCCGACCT GTACGGCCTG CTGGCGACGC TGCTGTATCG CGCGCCGGAT
GCCGGCTTGC TGCAGCGCAT CGCCGTCGCG CCGCTGGACC CGGCCGACGC AGCCGCCGCC
GATCCCGCCG ACGCGGAAGC TGCCGCGGGC AGCGCCCTGA CGCAGGCCTG GCGCCGCCTG
GTCGCCCGCG CCGGCCAGAC CACCGCCGCG CAGGCCGACG ATGAATACAC CGAGCTGTTC
ATCGGCGTCG GCAAGCCGGA GGTGTTCCTG TACGGCTCGT ACTACCAGGC CGGCTTCCTC
AACGAGAAGC CGCTGGTGGT GCTGCGCGCC GACCTGCGCC GCTACGGCCT GGAACGCGCC
GAGGGCATCA CCGAGACCGA AGACCACCTC GCCACGCTGT GCGAGGTGAT GCGCTACCTG
ATCGCCGGGG AGGATGCCGC CGTGGCTCAC GTGGCGGAGC AGCGCACATT CTTCCAGCGC
CACCTGGCGC CGTGGGCCGA GTCTGCCTGC GATGCCGTGC TGCAGCATCC GCGCGCCGCG
TTCTATGCCG GGGTGGCGGG GCTGGCGAAG GCGTTTTTTG AAGTCGAGCG GCTCGCCCTC
GAGCTGGCGT GA
 
Protein sequence
MTDAQPLQFQ LAATPADSAE DLARADLYGL LATLLYRAPD AGLLQRIAVA PLDPADAAAA 
DPADAEAAAG SALTQAWRRL VARAGQTTAA QADDEYTELF IGVGKPEVFL YGSYYQAGFL
NEKPLVVLRA DLRRYGLERA EGITETEDHL ATLCEVMRYL IAGEDAAVAH VAEQRTFFQR
HLAPWAESAC DAVLQHPRAA FYAGVAGLAK AFFEVERLAL ELA