Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2375 |
Symbol | |
ID | 1221221 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2578960 |
End bp | 2579631 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637238775 |
Product | hypothetical protein |
Protein accession | NP_520496 |
Protein GI | 17547094 |
COG category | [R] General function prediction only |
COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00953085 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCGACG CTCAGCCCCT GCAGTTCCAG CTTGCCGCCA CGCCCGCCGA CAGCGCGGAG GATCTCGCCC GCGCCGACCT GTACGGCCTG CTGGCGACGC TGCTGTATCG CGCGCCGGAT GCCGGCTTGC TGCAGCGCAT CGCCGTCGCG CCGCTGGACC CGGCCGACGC AGCCGCCGCC GATCCCGCCG ACGCGGAAGC TGCCGCGGGC AGCGCCCTGA CGCAGGCCTG GCGCCGCCTG GTCGCCCGCG CCGGCCAGAC CACCGCCGCG CAGGCCGACG ATGAATACAC CGAGCTGTTC ATCGGCGTCG GCAAGCCGGA GGTGTTCCTG TACGGCTCGT ACTACCAGGC CGGCTTCCTC AACGAGAAGC CGCTGGTGGT GCTGCGCGCC GACCTGCGCC GCTACGGCCT GGAACGCGCC GAGGGCATCA CCGAGACCGA AGACCACCTC GCCACGCTGT GCGAGGTGAT GCGCTACCTG ATCGCCGGGG AGGATGCCGC CGTGGCTCAC GTGGCGGAGC AGCGCACATT CTTCCAGCGC CACCTGGCGC CGTGGGCCGA GTCTGCCTGC GATGCCGTGC TGCAGCATCC GCGCGCCGCG TTCTATGCCG GGGTGGCGGG GCTGGCGAAG GCGTTTTTTG AAGTCGAGCG GCTCGCCCTC GAGCTGGCGT GA
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Protein sequence | MTDAQPLQFQ LAATPADSAE DLARADLYGL LATLLYRAPD AGLLQRIAVA PLDPADAAAA DPADAEAAAG SALTQAWRRL VARAGQTTAA QADDEYTELF IGVGKPEVFL YGSYYQAGFL NEKPLVVLRA DLRRYGLERA EGITETEDHL ATLCEVMRYL IAGEDAAVAH VAEQRTFFQR HLAPWAESAC DAVLQHPRAA FYAGVAGLAK AFFEVERLAL ELA
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