Gene RSc2364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2364 
Symbol 
ID1221210 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand- 
Start bp2567485 
End bp2568108 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID637238764 
Producthypothetical protein 
Protein accessionNP_520485 
Protein GI17547083 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.156809 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCCGA GCACCGGCGC GTTCCAGCCT GCCGCTTGCG TATCCATGCC CCATCAGCGT 
CTTTTTATTG CGCTCGACCC GAGCGCCGGC ACGATCGATG CTTTGCGCCG CGTCGCCACG 
CCTTTGGCGG CGCAGCCCTG GCCTCACGCG CGTTGGATGC CCCGTGACCA GTGGCACGCA 
ACGGTGCGAT TTCTCGGCGC AACGCCGGAA GACGGCGTTC CGTATTGGAT GCGGATGCTG 
GAGTCGCTTG CTGGCCTGGC CGCCGAACGG GGGCCGTTGG GGATCATTGG AGCGGCGCTG 
TGGCCGTCGC CTGCACGCCC GCGGGTACTG GTGGTGACGG CAAAGCCCGA GGATTGGGCG 
CAGGCAATGG CGTCGCGCGC GGAAGCGCTA GCCCGTGATG CGGGCTATCG CCCGGAGACG 
CGGCCGTTTC AGCCGCACAT CACGCTGGCC CGGCTGGGCG GGGCGTCGGC ATCGCCGGCT 
TGCGTCGCCG CGCTGGAGAC GGCCGCACAC GCGTTGCACG GTGCGGCCAT GCGGTTCGAC 
AGCCTGTCGC TCTTCGCCAG CCGCACGCCC CCGGACGGGC CGTGGTTCGA GCGGCTGGCG 
ACGGTCCGGC TGTCCGGCGG TTAG
 
Protein sequence
MRPSTGAFQP AACVSMPHQR LFIALDPSAG TIDALRRVAT PLAAQPWPHA RWMPRDQWHA 
TVRFLGATPE DGVPYWMRML ESLAGLAAER GPLGIIGAAL WPSPARPRVL VVTAKPEDWA 
QAMASRAEAL ARDAGYRPET RPFQPHITLA RLGGASASPA CVAALETAAH ALHGAAMRFD 
SLSLFASRTP PDGPWFERLA TVRLSGG