| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2352 |
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| Symbol | |
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| ID | 1221198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2551345 |
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| End bp | 2552673 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238752 |
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| Product | permease transmembrane protein |
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| Protein accession | NP_520473 |
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| Protein GI | 17547071 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.789866 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.830422 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACCA CCACCCCGCC TCTCGGCCCG AGCGCCGGCG CGCTGCCGCC CCAGTCCGCC
AGCGGCTTCG AGGAAGCCAC GTACCGCAAG GTCAGCTGGC GCCTGATCCC CTTTCTGCTG
CTGTGCTACG TGGTCGCCTA CCTGGACCGG GTCAACGTCG GCTTCGCCAA GCTGCAGATG
CTGAACGATC TCAAGTTCAG CGAGACCGTG TACGGGCTGG GCGCGGGCAT CTTCTTCATC
GGCTACTTCC TCTTCGAGGT GCCCAGCAAT GTGATCCTGC ATCGGGTCGG CGCGCGGATG
TGGATCGCGC GGATCATGAT CTCGTGGGGC CTCATCTCCG CGGCCATGAT GTTCGTGACC
ACGCCGGCCA TGTTCTACGT GATGCGCTTC CTGCTCGGCC TGGCCGAGGC GGGCTTCTTC
CCGGGCATCA TCCTGTACCT CACGTACTGG TATCCGGCCG AGCGGCGCGG GCGCACCACC
ACGTTCTTCA TGACGGCCGT GGCGCTGTCG GGCGTGATCG GCGGCCCCAT CTCGGGCTGG
GCGCTCAAGA CGTTCGGGGG CGTCTACGGC CTGGCCGGCT GGCAGTGGAT GTTCCTCATC
GAGGGCATCC CGTCGGTCGT CATCGGGCTG TGCGTGCTGG CCTACCTGGA CAATCGCATC
AGCCACGCCA GGTGGCTGAC CGACGAGGAA AAGGCCCTGC TCACCCGCAA CATCGCGGCC
GAGGAGGCGC AGAAGGAAGA CGCGCCCATC GCCGCCATCA TGGCCAGCCC GCGCGTCTGG
CTGATGAGCC TGATCTACTT CAGCTTCGTG ATGGGCCTGT ACGGGGTGAG CTTCTGGCTG
CCGACGCTGA TCAAGCAGAC CGGCGTGGCC GATCCGCTGT CGGTGGGCCT GCTGACGGCG
ATCCCGTACG GCGCGGCGGT GGTCGCCATG GTGCTGGTCG CCCGCAGCGC CGACCGCACG
CGCGAGCGCC GCTGGCACAT TGCCATCCCG GCCCTCGCGG GCGCGATCGG GCTGGTGCTC
TCGGCGGTCT GGCACACCAA CACCACGCTG GCCATGGCGG CGCTGACGCT CGGCACCATG
GGCATCCTGA CCACGCTGCC GCTGTTCTGG AGCCTGCCGA CCGCCTTCCT GGCCGGCACC
GGCGCCGCCG CCGGCATCGC GCTGATCAAT TCGCTGGGCA ACCTGGCCGG CTTCCTGAGC
CCCTACGCCG TGGGCTGGCT GAAGGACACC ACCCGGAGCA CCGACTCGGG CATGTACCTG
CTGGCGGCGT CGATGGTGCT GGGCGCGCTG CTGACCCTGT CGGTGCCCGC GCGGACGGTC
AACCGGTAG
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| Protein sequence | MATTTPPLGP SAGALPPQSA SGFEEATYRK VSWRLIPFLL LCYVVAYLDR VNVGFAKLQM
LNDLKFSETV YGLGAGIFFI GYFLFEVPSN VILHRVGARM WIARIMISWG LISAAMMFVT
TPAMFYVMRF LLGLAEAGFF PGIILYLTYW YPAERRGRTT TFFMTAVALS GVIGGPISGW
ALKTFGGVYG LAGWQWMFLI EGIPSVVIGL CVLAYLDNRI SHARWLTDEE KALLTRNIAA
EEAQKEDAPI AAIMASPRVW LMSLIYFSFV MGLYGVSFWL PTLIKQTGVA DPLSVGLLTA
IPYGAAVVAM VLVARSADRT RERRWHIAIP ALAGAIGLVL SAVWHTNTTL AMAALTLGTM
GILTTLPLFW SLPTAFLAGT GAAAGIALIN SLGNLAGFLS PYAVGWLKDT TRSTDSGMYL
LAASMVLGAL LTLSVPARTV NR
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