Gene RSc2349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2349 
Symbolppa 
ID1221195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp2548301 
End bp2548828 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content62% 
IMG OID637238749 
Productinorganic pyrophosphatase 
Protein accessionNP_520470 
Protein GI17547068 
COG category[C] Energy production and conversion 
COG ID[COG0221] Inorganic pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.665297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCA ACAACGTCTC GCCGGGCAAG GACATCCCCA ACGACTTCAA CGTCATCATC 
GAGATCCCGG CGCAGAGCGA CCCGGTCAAG TACGAAGCCG ACAAGGAAAC CGGCCTGCTG
CACGTGGACC GCTTCGTCGG TACCGGCATG CGCTATCCGG CCAACTACGG CTTCATCCCG
CAGACGCTGG CCGGCGACGG CGATCCGGTG GACGTGCTGG TCGTCACGCC GTTCCCGCTG
GTCCACGGCT GCGTGGTGCG TTGCCGCACC CTGGGCATGC TGAAGATGAC CGACGAGTCG
GGCCAGGACG CCAAGCTGGT CGCCGTGCCG GTCAACAAGC TGTCGCCGGC CACCGCGCAC
ATGACGGACC TGTCCGACAT CGGCCAGAAC CTGCTTGACC AGATCAAGCA TTTCTTCGAG
CAGTACAAGG CGCTGGAGCC CGGCAAGTGG GTCAAGGTGG AAGGCTGGGG CGGCATCGAG
GAAGCGCATA AAGAAATCGT CGATGGCGTA GCCAACTATA AGAAGTAA
 
Protein sequence
MSFNNVSPGK DIPNDFNVII EIPAQSDPVK YEADKETGLL HVDRFVGTGM RYPANYGFIP 
QTLAGDGDPV DVLVVTPFPL VHGCVVRCRT LGMLKMTDES GQDAKLVAVP VNKLSPATAH
MTDLSDIGQN LLDQIKHFFE QYKALEPGKW VKVEGWGGIE EAHKEIVDGV ANYKK