Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc2208 |
Symbol | |
ID | 1221052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 2392291 |
End bp | 2392989 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637238606 |
Product | putative pirin-like protein |
Protein accession | NP_520329 |
Protein GI | 17546927 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.677646 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.549233 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTGAAA TCCGACCCTC CCAGGAGCGC GGTTACGCCG ACCACGGCTG GCTCCAGTCG TACCACAGCT TCTCGTTCGC CGAGTACATG GATCCGGACC ACGTCCACTT CGGGCCGCTG CGCGTCATCA ACGAAGACCG CGTCGCGCCC GGCATGGGCT TCGGTACGCA CGGCCATCGC GACATGGAGA TCATCAGCTA CGTGCTCGAC GGTGAACTGG CGCACAAGGA CAGCCTCGGC AACGGCAGCG TGCTGCGCCC GGGCGACGTG CAGCGCATGA CGGCTGGGAC CGGCGTGCGT CATTCCGAGT TCAACCATGC GCCGGACCAG ACCACGCACT TCCTGCAGAT CTGGGTGCTG CCTGCGCAGC AGGATCTCGC GCCGGGCTAC GAGGAGCGCC ATTTCGAGGC GTCGCAGAAG CGTGGCAGGC TGCGCCTGAT CGCCAGCGCC GACGGACGCG ACGACTCGGT CAGGGTGCAC CAGGACATGG CCCTGTACGC CGGCCGTTTC GATGGCGCCG AGGCCGCCAC GCTGCCCCTC GCCGACGGTC GCCGCGCCTA TGTGCACGTG GTGCGCGGCA AGGTCGAGGT CAACGGCACG CCGCTGTCGG GCGGCGATGC GGCTAAGCTG ACGCGGGAGC CGACCGTCAC GCTGTCGGGG GGCGAGGGCA GCGAGGTGCT GGTGTTCGAT CTACCCTGA
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Protein sequence | MIEIRPSQER GYADHGWLQS YHSFSFAEYM DPDHVHFGPL RVINEDRVAP GMGFGTHGHR DMEIISYVLD GELAHKDSLG NGSVLRPGDV QRMTAGTGVR HSEFNHAPDQ TTHFLQIWVL PAQQDLAPGY EERHFEASQK RGRLRLIASA DGRDDSVRVH QDMALYAGRF DGAEAATLPL ADGRRAYVHV VRGKVEVNGT PLSGGDAAKL TREPTVTLSG GEGSEVLVFD LP
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