| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2177 |
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| Symbol | |
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| ID | 1221021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2361337 |
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| End bp | 2362479 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238575 |
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| Product | lipoprotein |
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| Protein accession | NP_520298 |
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| Protein GI | 17546896 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.186989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGTTA CCCGCAGGAT CACGCTGGCC GCCCTGGCCG CCGGCGCCGC CATGGCCCTC
TTGGGCTGCG GCAAATCCAA CGAAGCGGAC AAGACCGCCG CGCCCGCCGC CTCGGCACCC
GCCGCGGCCA CCGCGGCCGG GCCGCTGAAG GTCGCGTTCG TCTACGTCGG CCCGGTCGGC
GATGCCGGCT GGACCTTCTC CCACGACATG GGCCGCAAGG CCGTCGAGGC CAAGTTCGGC
AACAAAGTGA AGACCACCTT CATCGAAAGC GTGCCCGAGA GCGCGGCCGA CGCCGAGCGC
GTATTCCGCG ACCTCGCCAC CCAGGGCTAC AAGGTCATCT TCGGCACCAG CTTCGGCTTC
ATGGAGTCGA TGCTCAAAGT CGCCAAGGAA TTCCCGGACG TGAAGTTCGA GCACGCCACC
GGCTTCAAGA CCGCCGACAA CCTGGCCCAG TACGACGTGC GCACGTACGA GGGCGCCTAC
CTGGCGGGCG TGGTGGCCGG CAAGATGAGC AAGTCGGGCC AGCTGGGCGT GGTGGGTTCG
GTGCCCATCC CCGAGGTGAT CCGCAATATC GACGCGTTCA CGCTGGGCGC GCGCAGCGTC
AACCCGAAGG CCACCACCCG CGTGGTGTGG GTCAACAAGT GGTTCGATCC GGGCAAGGAG
CGCGAGGCCG CCACCACGCT GATCGGCCAG GGCGTCGACG TGCTGATGCA GAACACCGAC
TCCGCCGCCG TGGTGCAGAC CGCCCAGGAG AAAGGCGCCT ACGCGATCGG CTGGGACAGC
GACATGACCA AGTTCGGCGA CAAGGCCCAC CTGGCCGCCT CGATGAACAA CTGGGGCGTG
TACTACACCA AGGTCGTCGG CGATGTGCTC GACAACCAGT GGAAGTCCGG CTCGACCTGG
TGGGGCCTGA AGGAAGGCGC GATCGACCTG GGCGCGTTCA ATCCGGTGGT GCCGCAAGAC
GTCAAGGCGC TGGTCGAGAC CCGGAAGAAG GGCGTGATCG ACGGCTCCGC CCCGATCTGG
AAGGGCCCGC TCAAGGACAA CACCGGCCGC GAAGTCCTGC CCGCCGACAA GGTCGCCGAC
GACGGCTTCC TGCACGGCAT CAAGTTCTAC GTGGAAGGCG TGGAAGGCAA GATTCCGGGC
TGA
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| Protein sequence | MNVTRRITLA ALAAGAAMAL LGCGKSNEAD KTAAPAASAP AAATAAGPLK VAFVYVGPVG
DAGWTFSHDM GRKAVEAKFG NKVKTTFIES VPESAADAER VFRDLATQGY KVIFGTSFGF
MESMLKVAKE FPDVKFEHAT GFKTADNLAQ YDVRTYEGAY LAGVVAGKMS KSGQLGVVGS
VPIPEVIRNI DAFTLGARSV NPKATTRVVW VNKWFDPGKE REAATTLIGQ GVDVLMQNTD
SAAVVQTAQE KGAYAIGWDS DMTKFGDKAH LAASMNNWGV YYTKVVGDVL DNQWKSGSTW
WGLKEGAIDL GAFNPVVPQD VKALVETRKK GVIDGSAPIW KGPLKDNTGR EVLPADKVAD
DGFLHGIKFY VEGVEGKIPG
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