| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2103 |
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| Symbol | |
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| ID | 1220944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2278367 |
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| End bp | 2279170 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637238498 |
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| Product | amino-acid-binding periplasmic (PBP) ABC transporter protein |
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| Protein accession | NP_520224 |
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| Protein GI | 17546822 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT TGCTCACCCG CCGCACATTC ATCCACGCCA TGCTGGCGGC CAGCGCCGTG
GCCGCCTTGT TGCCGGGCCG TCCGGCCCAT GCCGATGCGC TGGCCAACAT CCAGAAAGCG
GGCGTGATCC GCGTGGCCAT TCCGAATGAC TTCCCGCCGT TCGGCTCGCT GGGCACAGAC
CTGAAACTGC AGGGCTATGA CATTGACATG GCCAACCTGG TCGCCAAGGA ACTGGGCGTC
AAGGCGGAAC TCGTGCCCGT CACGAGCACC AACCGCATTC CGTTCCTGAC CACCGGCAAG
GTCGACGTGG TGATCTCCAG CCTGGGCAAG AACGCAGAGC GCGCCAAGGT GATCGACTTC
ACGCAGGCGT ATGCACCGTT CCCCAAGAGC GTCTACGGCC CCAAGGATGT CTCGATCAAG
ACGCCGGCGG ATCTGGCCGG CAAGACGATT GGCGTGACGC GCGGCTCCAC TGAAGATCTG
GCGCTGACAG CCGTTGCCCC GGCCTCGGCC ACCATCAAGC GCTACGAAGA CAACAACGCC
ACCGCACAGA GTTACCTGAT CGGTCAGGTG CAACTGGTGA CGCTGGGCAA CATCGTGGCC
AATGCGGTGA ACGAGCGCAC GCGCCTGCGC CAGTTGGACG TGAAGTTCCC GGTGGAAGAC
ACCCCCTGCT ATGTGGGTGT GGCCAAGGGC GAACCCGCAC TGCTGGAGAA GGTGAACGCC
GCCATCACCA AGCTCAAGTC TGACGGGCGC CTGAACGATC TGTCGCAGCG CTGGATCAAG
ATGCCGCTGC CCGCAAAACT GTAA
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| Protein sequence | MTRLLTRRTF IHAMLAASAV AALLPGRPAH ADALANIQKA GVIRVAIPND FPPFGSLGTD
LKLQGYDIDM ANLVAKELGV KAELVPVTST NRIPFLTTGK VDVVISSLGK NAERAKVIDF
TQAYAPFPKS VYGPKDVSIK TPADLAGKTI GVTRGSTEDL ALTAVAPASA TIKRYEDNNA
TAQSYLIGQV QLVTLGNIVA NAVNERTRLR QLDVKFPVED TPCYVGVAKG EPALLEKVNA
AITKLKSDGR LNDLSQRWIK MPLPAKL
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