Gene RSc2044 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc2044 
Symbol 
ID1220884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand- 
Start bp2217160 
End bp2218290 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content70% 
IMG OID637238438 
Productputative acyl-CoA dehydrogenase oxidoreductase protein 
Protein accessionNP_520165 
Protein GI17546763 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.761176 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.220022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTCT CGTTCACCGA CGAACAGAAG CAGCTGGCGG ATGCGGTACG CCGCTTCATC 
GACAAGGATT ACGGCTTCGA AGCGCGCAAC AAGGTCGTCT ACTCGCCCGC GGGCGTGTCG 
CAGGCGCATT GGGACGCCCT GGCCGAGCTG GGCTTGACCG CGCTGCCGGT GCCGCAAGCG 
CAGGGCGGCT TCGATGGCAG CGCGATGGAC CTGCTGGTGG TGATGCAGGA ACTGGGGCGC 
GGCCTGGTGG TGGAGCCCTA TGCGGCCACC GTGCTGGGCA TGCAGGCACT CAAGCTGGCG 
GGCGGCCAGG AGGCGCTGCT GGAGCCGGTG GCGGGCGGCG CGCTGAAGCT GGCGGCGGCC 
TTTGGCGAGC CGCAGTCGCG CTATGAGTTG TTCAACGTGA CCACGCGCGC GGCGCGGCAG 
GGCGGCGGCT GGACGCTGTC GGGCGCCAAG GCCGTGGTGG TGCACGGCGG GCAGGCCGAC 
AAGCTGGTCG TGTCGGCGCG CACGGGCGGC GAGGCGCGCG ACACATCGGG CCTGTCGCTG 
TTCCTGGTCG ATCGCGAGGC CGCGGGCGTG ACGGTCAAGG ACTACCGCAC CATCGATAAC 
CTGCGCGCGG CCGACGTCCG CTTCGACAAT GCGCCGGCTA CGCTGCTCGG CCAGGCCGGC 
GAGGCGTGGG AGATCATCGA TGCGGTGGCG GATCTCGGCT GCGTGCTGCT GTGCGCCGAG 
GCGATCGGCC TGATCGATGC GCTGAACGCC GCCACGCTGG AATACACCAA GACGCGCCAG 
CAGTTCGGCG TGCCGATCGC GCGCTTCCAG GCGCTGCAGC ACCGCATGGT CGACATGTTC 
ATCCATGCGG AGCAGGCGCG CTCGATCACC TATCTCGCGG CGGCGCATTT CGAAGACGGC 
GATGCCGAGG CGCGCCGCCG CTACGTGTCG GCCGCCAAGG CGCGCGTCGG CCAGGCGGCC 
CGCGAAGTGG GGCAGGAGGC GGTGCAGCTG CACGGCGGCA TGGGCGTGAC CAATGAGCTG 
CCCGCCGCGC ACATGTTCAA GCGGCTGACG ATGATCAACA CCACGCTCGG CGATGTCGAT 
CACCATCTGG CGCGCTTTGC GTCGCGGCCG GGCTTCCGTG ACGCCGCGTG A
 
Protein sequence
MDFSFTDEQK QLADAVRRFI DKDYGFEARN KVVYSPAGVS QAHWDALAEL GLTALPVPQA 
QGGFDGSAMD LLVVMQELGR GLVVEPYAAT VLGMQALKLA GGQEALLEPV AGGALKLAAA 
FGEPQSRYEL FNVTTRAARQ GGGWTLSGAK AVVVHGGQAD KLVVSARTGG EARDTSGLSL 
FLVDREAAGV TVKDYRTIDN LRAADVRFDN APATLLGQAG EAWEIIDAVA DLGCVLLCAE 
AIGLIDALNA ATLEYTKTRQ QFGVPIARFQ ALQHRMVDMF IHAEQARSIT YLAAAHFEDG 
DAEARRRYVS AAKARVGQAA REVGQEAVQL HGGMGVTNEL PAAHMFKRLT MINTTLGDVD 
HHLARFASRP GFRDAA