| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc2013 |
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| Symbol | paaH2 |
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| ID | 1220853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 2191733 |
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| End bp | 2193241 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 637238407 |
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| Product | 3-hydroxy-acyl-CoA dehydrogenase |
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| Protein accession | NP_520134 |
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| Protein GI | 17546732 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.322251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0551867 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGA TCGGGATCGT GGGTACCGGC GCCATGGGGC GCGGCATTGC GCAGATCGCG
GCCCAGGCCG GCCTGCGCGT CAGGCTGTTC GACGCCAGCC CACAGGCCGT GGAGGCGGCC
CGCGCCGCGC TGGCCGATAC GCTCGCCAGG CTGGCGGCCA AGGGCCGGCT CACCGCCGAC
CAGGCCGACG CCGCCCTCGC GCGCCTGATG CCGGCCGCCG CCCTCGCCGA GCTGGCCGAC
TGCGACCTCG TGGTCGAGGC CATCGTCGAG AACCTGGAGG CCAAGCGCGA TCTGTTCCGC
CAGCTCGAGG CCATCGTGGG GCCGGAGACG ATCCTCGCCT CCAACACCTC GTCGCTGTCG
ATCACGGCGA TTGCCGCCGC GTGCCGGCGG CCCGAGCGCG TGGCTGGCTT CCATTTCTTC
AACCCGGTGC CGCTGATGAA GGTGGTCGAG GTGATCGCGG GCCTGCGCAG CGCCCCCGCC
GCCTGCGATG CCCTGGCCGC CCTGGCCGGG CGCATGGGCC ACGCCGCCGT GCGCTGCACC
GACATGCCGG GCTTCATCGT CAACCACGCG GGGCGCGGCA TGAACACCGA GGGCCTGCGC
GTGGTTCAGG AAGGCGTGAC CGCCTTTGCC GACGTGGATG CGGTGATGCG CGAGCAGGCC
GGCTTCCGCA TGGGCCCGTT CGAGCTGATG GACCTGACCG GGCTGGATGT GTCGCATCCG
GTGATGGAGT CGATCTACCG GCAGTTCTAT GACGAGCCGC GCTACCGGCC GTCGCGGATC
ACCGCCGTGC GGCTGGCCGG CGGCCTGCTC GGCCGCAAGA CCGGCGAAGG CTTCTACCGC
TACGCCGACG GCCAGAAGCC GGTGCCGCCG GAAGCGGCCG CGCCCGCCGC GCGGCCGAAG
TCGGTGTGGG TCAGCCGCGC GCACGCGGCC GGCCACACCG CCGCGCAGCG CCTGCTGCTG
GACCTGTGTG TCACACCCGA GGACGGCGCC TGGCCCTCGG CCGAAGCGCT CATCGTGGTG
ACGCCGCGCG GGCTCGACGC CACGGCCGCC GCGGTGGCCG AAGGCCTGGA CGGCCGCCGC
ACCGTCGCGC TCGATACGCT CTATCCGTTC GCCGCCACCC GGCGCCGCAC GCTGATGACC
ACGCCCGCCA CCGACCCCGC CCACCGCGAC GCCGCGCACG GCCTGTTCGC CGCCGACGGC
GTGCCGGTGA CGGTGATCCG CGACTCGGGC GGCTTCGTGG CGCAGCGCAT CGTCGCGTGC
ATCGTCAACA TCGCATGCGA CATCGCGCAG CAGCGCATTG CCACGCCGGC CGACATCGAC
CTGGCCGTCA CGCTGGGCCT GGGCTACCCG CAGGGGCCGC TGGCGTTGGG CGACACGCTC
GGCGCGGGCG CGGTGCTCGA AGTGCTGCAG AATCTCACCA CGCTGTACGG CGACCCGCGC
TATCGCCCAA GCCCATGGCT GCTGCGCCGC GCGCGCCTGG GCCTGTCGCT GCTGACGCCG
GACGCCTGA
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| Protein sequence | MNAIGIVGTG AMGRGIAQIA AQAGLRVRLF DASPQAVEAA RAALADTLAR LAAKGRLTAD
QADAALARLM PAAALAELAD CDLVVEAIVE NLEAKRDLFR QLEAIVGPET ILASNTSSLS
ITAIAAACRR PERVAGFHFF NPVPLMKVVE VIAGLRSAPA ACDALAALAG RMGHAAVRCT
DMPGFIVNHA GRGMNTEGLR VVQEGVTAFA DVDAVMREQA GFRMGPFELM DLTGLDVSHP
VMESIYRQFY DEPRYRPSRI TAVRLAGGLL GRKTGEGFYR YADGQKPVPP EAAAPAARPK
SVWVSRAHAA GHTAAQRLLL DLCVTPEDGA WPSAEALIVV TPRGLDATAA AVAEGLDGRR
TVALDTLYPF AATRRRTLMT TPATDPAHRD AAHGLFAADG VPVTVIRDSG GFVAQRIVAC
IVNIACDIAQ QRIATPADID LAVTLGLGYP QGPLALGDTL GAGAVLEVLQ NLTTLYGDPR
YRPSPWLLRR ARLGLSLLTP DA
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