| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1989 |
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| Symbol | leuD |
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| ID | 1220829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2166046 |
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| End bp | 2166696 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637238383 |
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| Product | isopropylmalate isomerase small subunit |
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| Protein accession | NP_520110 |
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| Protein GI | 17546708 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0066] 3-isopropylmalate dehydratase small subunit |
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| TIGRFAM ID | [TIGR00171] 3-isopropylmalate dehydratase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.108393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.122057 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAACAAT TCACCATCCA CACCGGCCTG GTTGCGCCGC TGGACCGCGA GAACGTCGAT
ACCGACGCCA TCATTCCGAA GCAATTCCTC AAGTCGATCA AGCGTACCGG CTTCGGCCCG
AACCTGTTCG ACGAGTGGCG CTACAAGGAC GTGGGCGAGC CCGGCCAGGA CAACAGCAAG
CGTCCGCTGA ACCCGGACTT CGTGCTGAAT CAGCCGCGCT ATCAGGGCGC ATCGGTCCTG
CTTGCGCGCA AGAACTTCGG CTGCGGCAGC TCGCGCGAGC ATGCTCCCTG GGCGCTGCAG
CAGTACGGCT TCCGCGCCAT CATCGCGCCG AGCTTTGCCG ACATCTTCTT CAACAACTGC
TTCAAGAACG GCCTGCTGCC GATCGTGCTG ACGGAGTCGC AGGTCGACCA CCTGTTCAAC
GAGACGCAGG CCTTCACCGG CTACCAGCTC ACTGTGGATC TGGACAAGCA GGTTGTCGTC
ACGCCGGGCG GCACGGCCTA TCCGTTCGAT GTCACGGCCT TCCGCAAGTA CTGCTTGCTC
AACGGTTTCG ACGACATCGG CCTGACCCTG CGCTACGCCG ATCAGATCAA GGCCTACGAA
GCACAACGCC TGGCCAAGAT GCCGTGGCTC GCGCACAAGC TGGTCGGCTG A
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| Protein sequence | MEQFTIHTGL VAPLDRENVD TDAIIPKQFL KSIKRTGFGP NLFDEWRYKD VGEPGQDNSK
RPLNPDFVLN QPRYQGASVL LARKNFGCGS SREHAPWALQ QYGFRAIIAP SFADIFFNNC
FKNGLLPIVL TESQVDHLFN ETQAFTGYQL TVDLDKQVVV TPGGTAYPFD VTAFRKYCLL
NGFDDIGLTL RYADQIKAYE AQRLAKMPWL AHKLVG
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