| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1961 |
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| Symbol | |
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| ID | 1220801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2139320 |
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| End bp | 2141635 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637238355 |
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| Product | putative ATPase protein |
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| Protein accession | NP_520082 |
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| Protein GI | 17546680 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.242778 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.909939 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGATG TCAACCTCAG CCTGGACGAC GCCGATGACG GCGCGTTCGT CCCCACCGGC
GGCAGGCAGC CGCAAGCGCT GCTGTCGTCG CTGGATTCCA TGTGCGCGCA GTTCGCGCTG
CGCACGGTGT GCGCGATGGG CCTGCGCTTC AACCTGCGCA CCAATATCAA CGACATCCTG
ACGGTGTGCG CGCCGGAACT GATCTGGCCG GTGACGGTCA TCCAGCGGCT GCAGCGCTTT
CTGGCCGCCC GCTGCGCCGA CATGCCGGGC TGGCGCAGCG TCGGCCGGCT GGACCTGTCC
ACCTTCATGG ACCGCCACGG CCAATGGAGC AGCGCCTTCG ATGAAGGCTC GCTGTTCTAC
TACCTCGACG AATACGTCAA GCATCACGCC AAGGACATGT TCACCGTGTT TGGCGCATCG
TGCGATGCGC TGAACGAACG GCTGGCGAGC GAGCGCGTGC TGCTGGTCGG CAACATCGAC
ATGCTCGCGC GCGTGCTGGG CCTGCCGCCG CACGAGCGGG CGCTGCTGCT GTTCGCGTCG
CTGGTCAAGT ACAAGCGCGA TCTGCGCGCG GTGATGGTCG ACTGCAAGGT GGCGCACAGC
CAGGAGGCCT TCCAGCTGCT GGCGGGCCTG GCCGGGGCCA GCACGGCCGA GGTGGCGGCC
TCGCTGCGGC CGGGGTCGCG GCTGGAGACG CTGGGGTTGA TCGAGCCGCC GCTGCCCGAG
AACAGCGTGA CTGACCTGGG CGACCTGATG CGCATCTCCG ATCGCCTGCT GCACGTGCTG
CTGGGCGACT ATGCCTGCGA GGCCGAGATG ATGGCCGTGT TCACGCGGCC GGCCCCGCCG
ACCACGCTGA CCCAGGCGGA CTACCCCCAC GTCGAGACCG ACGCGCGCTA CCTGGCGGCC
CTGCTGGAGA GCGCCACGCG CCAGCGCGCC ATGGGCGTCA ACATCCTGCT CTACGGTGCG
CCGGGCACAG GCAAGACCGA GCTGGCGCGC GTGCTGGCGC GCGACGCCGG CTGCGAGCTG
TACGAAGTCG ACTGCCTGGA CAAGGACGGC AACAGCCTGT CCGGCAAGGA CCGCTATCGC
TCGCTGCAGG TGTCGCAGGC CTTCCTGCGG GGCCGGTCGC GCGCGGTGCT GCTGTTCGAC
GAGGTCGAGG ATGTCTTCCC GGGGCCGACG CGCGAGCTGA TGAGCCTGTT CGGCCACGAG
GAGCCGCGCG GCTCGGTCAA CGGCAAGGCG TGGGTCAACC AGACCCTGGA GCAGAATCCG
GTGCCCGTGA TTTGGGTGTC GAACTCGATC CGCCAGATCG ATCCGGCCTA CCTGCGCCGC
TTCCAGTTCC ACCTGGAGCT GAGGGTGCCG CCGCCGATGG TGCGCGAGAG CATCATCCGC
AAGCACCTGG AGGGGCTGGA TGTCTCCGAT GCCTTCATGG CCAAGCTGGC GGCGCGCAAG
ACGCTCACGC CCGCGCAGAT CGATTCCGCC GCGCGGTTCG CGCGCCTGAC GCAGCCGGCC
ATGGCCGAGT CCGCGGAGTC GTTGATCGTG CGCCAGCTCG ACCATGCCGA CCACGCCATG
GGGATGCGCC CGGAGATGCA GGCCCATCGC GTCGTGACGG AATACCGGCT CGATTACCTG
AACCTGGAGA CGCGCTTCCC GGTCGAGCGC GTGATCGAGG CCCTGCGCGT GCGGCGGCGC
GGCACACTGT GCTTCTTCGG GCCGCCGGGC ACCGGCAAGA CCGTGCTGGC CGAGCACATC
GCCAGCCGGC TGGACATACC GCTGATGATC CGCCGCGCCT CCGACCTGAT GAGCAAGTAC
GTCGGCGAGA CCGAGCAGCA GATCGCGGCG ATGTTCGCGC GGGCCGAGGA GGAGCGCGCG
CTGCTGCTGC TCGACGAGGC CGACAGCTTC ATGCAGAGCC GCCAGGGTGC GGTACGCAAC
TACGAAGTGT CGGAAGTCAA CGAGATGCTG CAGGGCATGG AGCGCTTTGA CGGCATCTTC
GTCTGCACAA CCAATCTGTT CGACCGCATC GACGAGGCGG CGCTGCGGCG CTTTGCCTTC
AAGATCCGCT TCCGGCCGCT GGAGCGCGCG CAGCGCGAGC GGATGTTCAT CACCGAGGCG
CTGGGCGGCA ATGCGGACGC CATGACCGCG GCGTGGCGCG ATGCGCTTGC CTTGCTCGAC
GTGCTGACCC CCGGCGATTT CGCCACCGTC AAGCAGCAGG CGGTGCTCCT GGGCGAGGCG
CTCGATCCGG AGGCGTTCCT GGCGCAGTTG CGGCAGGAGC ACGCGATCAA GCCGGAGCTG
CGCGAACGGC GCTCGATGGG GTTTGTGCCG CGTTAG
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| Protein sequence | MDDVNLSLDD ADDGAFVPTG GRQPQALLSS LDSMCAQFAL RTVCAMGLRF NLRTNINDIL
TVCAPELIWP VTVIQRLQRF LAARCADMPG WRSVGRLDLS TFMDRHGQWS SAFDEGSLFY
YLDEYVKHHA KDMFTVFGAS CDALNERLAS ERVLLVGNID MLARVLGLPP HERALLLFAS
LVKYKRDLRA VMVDCKVAHS QEAFQLLAGL AGASTAEVAA SLRPGSRLET LGLIEPPLPE
NSVTDLGDLM RISDRLLHVL LGDYACEAEM MAVFTRPAPP TTLTQADYPH VETDARYLAA
LLESATRQRA MGVNILLYGA PGTGKTELAR VLARDAGCEL YEVDCLDKDG NSLSGKDRYR
SLQVSQAFLR GRSRAVLLFD EVEDVFPGPT RELMSLFGHE EPRGSVNGKA WVNQTLEQNP
VPVIWVSNSI RQIDPAYLRR FQFHLELRVP PPMVRESIIR KHLEGLDVSD AFMAKLAARK
TLTPAQIDSA ARFARLTQPA MAESAESLIV RQLDHADHAM GMRPEMQAHR VVTEYRLDYL
NLETRFPVER VIEALRVRRR GTLCFFGPPG TGKTVLAEHI ASRLDIPLMI RRASDLMSKY
VGETEQQIAA MFARAEEERA LLLLDEADSF MQSRQGAVRN YEVSEVNEML QGMERFDGIF
VCTTNLFDRI DEAALRRFAF KIRFRPLERA QRERMFITEA LGGNADAMTA AWRDALALLD
VLTPGDFATV KQQAVLLGEA LDPEAFLAQL RQEHAIKPEL RERRSMGFVP R
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