| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1894 |
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| Symbol | |
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| ID | 1220733 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 2080692 |
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| End bp | 2082299 |
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| Gene Length | 1608 bp |
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| Protein Length | 535 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637238287 |
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| Product | methyl-accepting chemotaxis transducer transmembrane protein |
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| Protein accession | NP_520015 |
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| Protein GI | 17546613 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG0840] Methyl-accepting chemotaxis protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0710104 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.94486 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAATTTTT TTGAGATTCA GGGAAATCAT CAAGGGGAAG TTATGGGTTT GCATCGCTTG
ACCGTTAAAA CCAAGTTGCT CGCCAGTTTC GGTTTGCTGG CGGCGATCGT CGTGGCGCTT
TCTGGTTTCG CCATTCTCGC GCTGGACGGC GCCAATGCGC GTTTCATCGG ATTTGTCGAC
GGCGTGAATG CCCGTGTGAT GCTGGTCAAC AGGATCCGGG CTGCGGTTGA CCGGCGCGCC
CTCGCGGCGC GCAACCTGGT GCTGGCGACC ACAGCGCAGG AGCGGGCGTT TGAAAAGGCG
GAAGCCGAGC GGGCCCATGA GGAAGTCCAC GCGGGTCTGG CCGAGCTGGA AACCAGGCTG
GCCGCGCCGG GCGTCACGGA CAAGGCGAGA CAACTGGGCG CGGAGATCCG GCGGATCGAG
AACGCCTATG GCCCGGTCGC GCTGGACATC GTCAAGCTGG CGGCGGAGGG GCAGCGCGAG
GCGGCCAACC AGAAGATCAA TGCCGAGTGC AAGCCGTTGC TCGATACGTT GGTCAAGGCC
GTGAAGGTCT ATGCGGGCTA CGGTGCCGAG CTGTCCCAGC GGACCCTGCA GGAGGCGGAG
GTGCGCGCGG CCTGGCTGCG CAGCATCGTG ATCGGCGCGA GCGTGGCTGC CGTCATGCTG
GCGGTCGGGC TGGGGCTGGT GATCACGCGC AGCCTGCTGA AGGCACTGGG CACGGAGCCC
GCGGTGCTCA ACGAGATCAC GCGGAAGATC TCGGCGGGGG ACCTGGCGCC GATTCCCCTT
GCGCAAGCCG CGCCGAAGGG CAGCGTGTTC GAATCGATGG CGGCCATGCA GCAGAGCCTG
GCGGGGATCG TCGGTGCGGT GCGCGGCGCC GCCAATGCCA TCTCGGTCGG CTCGGCGCAG
ATCGCGGCCG GCAATGTGGA TCTGTCTTCG CGCACGGAAG AGCAGGCGTC CTCGCTGCAG
CAGACCGTTT CGACCATGGA GCAGCTGACC GCGACGGTGC GGCAGAACGC CGACAACGCG
CGGCAGGCGA ACACCCTGTC CATCGATGCC TCGGCCGTGG CCCAGAAGGG TAGCGCGGAG
GTGGGCCAGG TCGTGGCAAC GATGGGGGAC ATCAGCCGGG AGTCCGTCAA GATCGGCGAG
ATCACCGGGA TCATCGAGAG CATTGCGTTC CAGACCAATA TCCTGGCCCT GAACGCGGCG
GTCGAGGCGG CGCGCGCGGG CGAGCAGGGC CGCGGGTTCG CGGTGGTGGC CAGCGAGGTG
CGCACGCTGG CGCAGCGCTC GTCCAGCGCG GCCAAGGACA TCAAGGAGCT GATCGGTGCG
TCGCTGGAGA AGATCACGAC CGGCTCGGGC GCGGCCGAGC AGGCGGGCCG CACCATGCAG
GCGGTCACGC TGGCGGTCGA AAAGGTCACG GCGATCATCC ACGAGATCAC CCAGGCTTCC
GAGGAGCAGA CCAGCGGCAT CGAGCAGATC AGCCATGCGA TGGGCCAGAT GGACCAGGTG
ACGCAGCACA ACGCGGCGCT GGTGGAGCAG GCGGCGGCGG CCTCCCAGTC CCTGGAGCAG
CAGGGCCGGG AGCTGGACCA CGCGGTGGCG TCGTTCCGGC TCGCCTGA
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| Protein sequence | MNFFEIQGNH QGEVMGLHRL TVKTKLLASF GLLAAIVVAL SGFAILALDG ANARFIGFVD
GVNARVMLVN RIRAAVDRRA LAARNLVLAT TAQERAFEKA EAERAHEEVH AGLAELETRL
AAPGVTDKAR QLGAEIRRIE NAYGPVALDI VKLAAEGQRE AANQKINAEC KPLLDTLVKA
VKVYAGYGAE LSQRTLQEAE VRAAWLRSIV IGASVAAVML AVGLGLVITR SLLKALGTEP
AVLNEITRKI SAGDLAPIPL AQAAPKGSVF ESMAAMQQSL AGIVGAVRGA ANAISVGSAQ
IAAGNVDLSS RTEEQASSLQ QTVSTMEQLT ATVRQNADNA RQANTLSIDA SAVAQKGSAE
VGQVVATMGD ISRESVKIGE ITGIIESIAF QTNILALNAA VEAARAGEQG RGFAVVASEV
RTLAQRSSSA AKDIKELIGA SLEKITTGSG AAEQAGRTMQ AVTLAVEKVT AIIHEITQAS
EEQTSGIEQI SHAMGQMDQV TQHNAALVEQ AAAASQSLEQ QGRELDHAVA SFRLA
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