| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1817 |
|---|
| Symbol | |
|---|
| ID | 1220655 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1985883 |
|---|
| End bp | 1987271 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637238209 |
|---|
| Product | putative siderophore biosynthesis oxidoreductase protein |
|---|
| Protein accession | NP_519938 |
|---|
| Protein GI | 17546536 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3486] Lysine/ornithine N-monooxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGA CTGCTTGCAC AACCCCAGCC GGCGAGATTC TCGATGTGGT CGGCATCGGG
ATTGGCCCGT TCAACCTGAG CCTGGCTGCG TTGCTCGCCG AAGCCGGATA CGACCGCACC
GTATTTCTCG AACGCAAGCC GTATTTCAGC TGGCATCCCG GCATGCTGCT CGAGGGGACA
ACGCTGCAGG TGCCGTTTCT TGCCGATCTG GTCAGCCTGG TCGCGCCAAC GAGCCGCTTC
AGCTTTCTGA ACTATCTGCA GGCCCACGAC CGCCTTTACA AGTTCCTTTT CTTCGAGAAC
TTTCATATCC CTCGGCGGGA GTATGACCAC TATTGCCAGT GGGTCAGCGG TCAATTGCCC
AGCCTGCGGT TCGGTAGCGA GGTCACGCGT GTCGACGTGG TGGACGGTTG CTATCGCGTG
ACGGCGCGCG CAGGCAACAG CGAAAGCATC CACTACGCGC ACAACCTTGT GCTCGGCACC
GGCACGCAAC CGTGGTTACC GGCGTGCCTG CATACGCTCG CACAGCGCTT CCCGGAAAAG
GTGATGCACA CCGCCGACTA CGCGCGACAC TTCGATATCG CAGGCAAACA GCGTGTGCTG
GTGCTGGGCT CCGGTCAGTC TGCCGCGGAA GTCATCCAGG CCCTGCTCAA TCGACAGTGC
GACGACGAGG CGCCGCAATG CGAGCTGGAC TGGGTCACCC GGGCCCCGGG TTTCCTGGCG
ATGGAATACT CGAAGCTGGG GCTTGAGCAT TTCACGCCGG ACTACACCGC TTACTTCCAC
GGGCTTGCGC AGAGCGTCAA GGATCGGGTA GTGCCGAAGC AGGGCCTGTT CTACAAGGGC
ATCAGTTCCA AAACGATCTC GGCGATCTAC GACTGCCTGT ACCACCGCAG TGTCGGTGAC
GCCCCGCTGC CGGTTCACCT GCGCGCCTTG AGCGAACTGC GCCACGTGGA GCCGACCGCG
AATGGGCGGC TCGATGCGCG GTTCACTCAC CTGCAGACAG GCCACACGTT TTCCATTGTG
GTCGACGCGA TCATATCGGG CTCGGGCTAC CGGTATACGT TGCCGTCGTT TCTCGATGGC
CTGGGCGACC GTGTCCATTA CGACGACATG AAACGGCTGA AGATCGACGC CGGTTATCGG
GTCGAGCATC GTGGTCCCGG GCAGATCTTC ATGCAGAACG GCGAACTGCA CACGCACGGC
ATCGGTGCGC CCGATTTGGG CCTCGGTGCT TGGCGGGCGG CGCACATTGC CAACCGGATT
GCCGGGCATG AGCTGTATCG CCTGCCGTCG CGGGTGGCAT TCCAGACGTT CGGGGCCGGC
GCGGAACAAT CACCATCGAC CGCCGGCACG ACACCCAGCC CCTCACATCA GACCATCGAG
GCGATTTGA
|
|---|
| Protein sequence | MKPTACTTPA GEILDVVGIG IGPFNLSLAA LLAEAGYDRT VFLERKPYFS WHPGMLLEGT
TLQVPFLADL VSLVAPTSRF SFLNYLQAHD RLYKFLFFEN FHIPRREYDH YCQWVSGQLP
SLRFGSEVTR VDVVDGCYRV TARAGNSESI HYAHNLVLGT GTQPWLPACL HTLAQRFPEK
VMHTADYARH FDIAGKQRVL VLGSGQSAAE VIQALLNRQC DDEAPQCELD WVTRAPGFLA
MEYSKLGLEH FTPDYTAYFH GLAQSVKDRV VPKQGLFYKG ISSKTISAIY DCLYHRSVGD
APLPVHLRAL SELRHVEPTA NGRLDARFTH LQTGHTFSIV VDAIISGSGY RYTLPSFLDG
LGDRVHYDDM KRLKIDAGYR VEHRGPGQIF MQNGELHTHG IGAPDLGLGA WRAAHIANRI
AGHELYRLPS RVAFQTFGAG AEQSPSTAGT TPSPSHQTIE AI
|
|---|
| |