| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1763 |
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| Symbol | |
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| ID | 1220601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1890411 |
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| End bp | 1891193 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637238155 |
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| Product | gluconate 5-dehydrogenase |
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| Protein accession | NP_519884 |
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| Protein GI | 17546482 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.401808 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.262128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCACGC TCAAGCATCT TTTCGACCTC TCCGGCAAGA CCGCGCTGAT CACCGGCGGC
TCGCGCGGGC TGGGCCTGCA GATTGCCGAG GCCCTGGGCG AGCAGGGCGC GCGCATCGTG
CTGTCGGCGC GCAAGGCCGA TGAGCTGAAA GACGCGCAGG CGCATCTGCT GTCGCTGGGC
ATCGCGGCCG ACTGGATCGC GGCGGACGGC GCGGTGGAGG CCGATATCCA GCGCCTGGCC
GACGAGGCGC TCGCCAAGCT CGGTCATGTG GACATCCTCG TCAACAACGC CGGGGCGACC
TGGGGCGCGC CGGCGGAGGA CCACCCGGTC GAAGCCTGGG ACAAGGTGAT GAACCTGAAC
ATCCGCGGCC TGTTCCTGCT CACGCAGCAG ATCGGCAAGC GCTCGATGAT TCCGCGCCAA
TACGGCAAGA TCGTCAACGT GGCGTCGATC GCCGGCCTGA AGGGCAACCC GCCGGGCACG
CTCGATACCA TCGCCTACAA CACGAGCAAG GGCGCCGTGG TCAATTTCAC GCGCGCGCTG
GCGGGCGAGT GGGGCAAGTA CGGCATCACC GTCAATGCCA TCGCCCCGGG CTTCTTCCCG
TCCAAGATGA CACGCGGCTC GCTGGAGAAG CTCGGCGTCG ACAAGCTGAC CGAAAAATCC
CCGCTGCACC GCCTCGGCGA CGAGGAGGAC CTCAAGGGCG TGGCCGCGCT GTTCGCTTCC
GACGCCTCCA AGCACATCAC CGGGCAGATC CTGGCGGTCG ACGGCGGCGT GAGCGTGGTG
TAA
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| Protein sequence | MGTLKHLFDL SGKTALITGG SRGLGLQIAE ALGEQGARIV LSARKADELK DAQAHLLSLG
IAADWIAADG AVEADIQRLA DEALAKLGHV DILVNNAGAT WGAPAEDHPV EAWDKVMNLN
IRGLFLLTQQ IGKRSMIPRQ YGKIVNVASI AGLKGNPPGT LDTIAYNTSK GAVVNFTRAL
AGEWGKYGIT VNAIAPGFFP SKMTRGSLEK LGVDKLTEKS PLHRLGDEED LKGVAALFAS
DASKHITGQI LAVDGGVSVV
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