Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1761 |
Symbol | |
ID | 1220599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1887189 |
End bp | 1888367 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 637238153 |
Product | acetyl-CoA acetyltransferase |
Protein accession | NP_519882 |
Protein GI | 17546480 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0183] Acetyl-CoA acetyltransferase |
TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.402553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.162883 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG CAGTGATCGT TTCCACCGCA CGTACGGGCC TGGCCAAGAG CTGGAAGGGC GCCTTCAACA TGACGCACGG CGCCACCATG GGCGGCCACG TGGTCAAGCA CGCCATCGAG CGCGCCAAGC TCGAGCCGGG CGAAGTTGAG GACGTGCTGA TGGGCTGCGC CAACCCGGAA GGCGCGACCG GCGCCAATAT CGCGCGCCAG ATCGCGCTGC GCGCCGGCTG TCCCGTCACC GTGCCGGGCG CGACCGTCAA CCGTTTCTGC TCGTCGGGCC TGCAGACCAT CGCCATGGCC GCGCAGCGCG TGATCGCCGA TGAAGGCGAC ATCTTCGTGG CCGGCGGCGT GGAATCCATC TCGTGCGTGC AGCAGGAGAT GAACCGCCAC ATGATGACCG AGGGCTGGCT CAACCGGCAC AAGCCCGAGA TCTACTGGAG CATGCTGCAG ACGGCCGAGA CCGTCGCTAA GCGCTACAAC ATTTCGAAGG CGCGCCAGGA CGAATACGGC GTGCAGAGCC AGCTGCGCGC CGCCGCCGCT GCCGCCGCGG GCAAGTTCAA CGACGAAATC GTGCCGATCA CGGTGACGAT GGGCGTGGCC GACGCCAAGA CCGGCCAGCT CGGCACGCGC GAGGTGACCC TCTCCGCCGA CGAAGGCATC CGCCCGGACA CCACGCTCGA AGGCGTGTCC AAGATCCGCA CGGCCATGCC GGGCGGCGTC GTCACCGCCG GCAATGCCAG CCAGTTCTCC GACGGTGCCT CGGCGGCCGT GGTGATGAAC GGCAAGGTGG CGGCCGCCCG CGGCCTGCAG CCGCTGGGTG TGTTCCGCGG TTTCGCCGTG GCCGGCTGCG AGCCGGATGA AATGGGGATC GGCCCGGTGT TCGCCGTGCC CAAGCTGCTC AGGAAGGCGG GCCTGAAGGT CGAGGACATC GGCCTGTGGG AGCTGAACGA GGCGTTCGCC GTGCAGGTGC TGTATTGCGC CGACACGCTC GGCATTCCGA TGGATCGCCT GAACGTCAAC GGCGGCGCCA TTGCCGTGGG CCATCCTTAC GGCGTGTCGG GCGCGCGCCT GGTCGGCCAC GCCCTGATCG AAGGCAAGCG CCGCGGCGTC AAGTACGTGG TCGTGACCAT GTGCATCGGC GGTGGCCAGG GCGCGGCGGG CCTGTTCGAG GTGCTCTGA
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Protein sequence | MTEAVIVSTA RTGLAKSWKG AFNMTHGATM GGHVVKHAIE RAKLEPGEVE DVLMGCANPE GATGANIARQ IALRAGCPVT VPGATVNRFC SSGLQTIAMA AQRVIADEGD IFVAGGVESI SCVQQEMNRH MMTEGWLNRH KPEIYWSMLQ TAETVAKRYN ISKARQDEYG VQSQLRAAAA AAAGKFNDEI VPITVTMGVA DAKTGQLGTR EVTLSADEGI RPDTTLEGVS KIRTAMPGGV VTAGNASQFS DGASAAVVMN GKVAAARGLQ PLGVFRGFAV AGCEPDEMGI GPVFAVPKLL RKAGLKVEDI GLWELNEAFA VQVLYCADTL GIPMDRLNVN GGAIAVGHPY GVSGARLVGH ALIEGKRRGV KYVVVTMCIG GGQGAAGLFE VL
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