| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1715 |
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| Symbol | ppiD |
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| ID | 1220553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1833798 |
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| End bp | 1835744 |
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| Gene Length | 1947 bp |
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| Protein Length | 648 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637238107 |
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| Product | peptidyl-prolyl cis-trans isomerase transmembrane protein |
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| Protein accession | NP_519836 |
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| Protein GI | 17546434 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0289129 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.110727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGATT TCGTACGTAC GCATCGGCGC TTGATGTTTC TGGTGCTGCT GATTCTGGTG
TTTCCGTCGT TCGTGTTCTT TGGTGTGCAG GGCTACTCGC GTTTCATGGA TGGCTCGCAC
GACGCTGCCA AGGTGGGTGA TACCGTCATC ACCACCAGCG AGCTCGATAC GCGCGTCCGC
GAGCAGACCG AGCGTCTGCG CCAGATGCTG GGCGCGCAGT ACGATCCACG CCAGTTCGAG
GGCCCACAGA TGCGCCGCGA CGTGCTGGAC GGCATCATCC AGCAGCGCGT GATGGTCAAT
GAGGCGTCGC GGGCCAATCT GTCGGTGGCG GACAGCAAGG TCCGCGAGAC CATCGAGCAG
ATCCCGGCGG TCGCGCAGCT GCGCAAGCCG GATGGGAAGT TCGATACCGA TGCCTACATC
AAGCTGCTGG CCGCCCAGGG CATGACGCCG GAGCAGTTCG ATGCGCGCCT GCGCTCGGAG
CTCGTGCTGC AGCAGATTCC GCAGTCGATC GTTTCGAGTG CCTTCGTGCC CAAGTCGCTG
GTGGATCGCC TGATCGAGGC GCGCGACCAG CAGCGTGAAG TGCAGGCGCT GCTGTTCAAG
CCGGCCGATT ACGCGGCCAA GGTGACGGTC GACGACAAGG CCATCCAGGC TTACTACGAC
GCGCACCAGC AGGAATTCGC GGTGCTTGAG CAGGTCAAGG CCGAGTACGT GGTGTTTTCG
GGCGAGGAGA TGATGAAGCA GATCCCCGTC ACGCCCGAGC AGCTCAAGGA GTACTACGAC
CAGAACGCCG CGCGCTTCAA GACCGAAGAG CAACGCCGCG CCGCGCACAT CCTGATCAAG
CTGCCGGACA ACGCCAAGCC CGCCGATAAG GACGCAGCCA AGAAGCGCGC GGAAGAGGTG
CTGGCCGAAG TGCGCAAGAG CCCGGGCAGT TTCGCAGAGC TCGCCAAGAA GTATTCGGGG
GATCCGGGCT CGGCCGCGCA GGGCGGTGAG CTGGGCTTCC TCGCCAAGGG CGCGACCGTG
CCGCCGTTCG AGAATGCACT GTTTGCGCTC AAGCAGCCGG GCGATATCAG CGATGTGGTG
GAGAGCGATT TCGGCTTCCA CATCATCAAG CTGGAAGACG TGAAGGGCGG TGGCGTGCAG
TCGCTGGACG CCGTCAAGCC GGAGCTGGAG CGCGAGGTGC GCACGCAGTT GGCCAACAAG
AAGTACACCG AGCTGGCCGA TGCCTTCTCC AACGGGGTGG AGGACCAGTC CGACAGCCTG
AAGCCGGTCG CCGACAAGCT CAAGCTGCAG ATCCAGACGG CCGACCATGT CACGCGCGTG
CCGAATCCGG CCCTGGGCAA CAGCCCGGTC AACAACGAGA AGGTGCTCAA GGCGCTGTTC
GCCGACGACG TGACCAAGAA CCATCGCAAT ACGCAGGCCG TGCAGGTCGG GCCGACCACG
CTGGTGGCGG CGCGTGCGGT GGAGTATCGG CCGGCCACGG TCAAGAAGCT GGCCGATGTG
CGCGAGCAGG TGAAGGCCAA AGTGCTGGCC GAGCAGTCGG CGGCGCTGGC CAAGAAGGCG
GGCGAAGAGA AGCTTGCCGC GCTCAAGCAG AGCAACAGCG CCGAGGGCTT TGGCACGGCG
CAGACGCTCT CGCGCCAGCA GGCGCAGGGC ACGCCGCCGG CCGCGCTGGT TGCGATCCTG
CGCGCGGATG CGGCCAAGCT GCCGGTCACC ATCGGCGTGG ATCTGGGGGC GCAGGGCTAT
GCGCTGTATC GCATCAACAA GGTGCTGCCG CCGGCCAATG TGGACCCGGC GCGGCGAGCG
GCCGATGCAC AGCAACTGAC GCAGGCAGCC GGACAGGCGG ATTTCAACGC CTACTATGAA
GCGCTGAAGG CGCGCTCGAA GGTGAAGATC AACGGCTCGG TGGTCGACGC CGCCAAGCCT
GCGGCTTCGT CGGACGACGG TTCCTGA
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| Protein sequence | MLDFVRTHRR LMFLVLLILV FPSFVFFGVQ GYSRFMDGSH DAAKVGDTVI TTSELDTRVR
EQTERLRQML GAQYDPRQFE GPQMRRDVLD GIIQQRVMVN EASRANLSVA DSKVRETIEQ
IPAVAQLRKP DGKFDTDAYI KLLAAQGMTP EQFDARLRSE LVLQQIPQSI VSSAFVPKSL
VDRLIEARDQ QREVQALLFK PADYAAKVTV DDKAIQAYYD AHQQEFAVLE QVKAEYVVFS
GEEMMKQIPV TPEQLKEYYD QNAARFKTEE QRRAAHILIK LPDNAKPADK DAAKKRAEEV
LAEVRKSPGS FAELAKKYSG DPGSAAQGGE LGFLAKGATV PPFENALFAL KQPGDISDVV
ESDFGFHIIK LEDVKGGGVQ SLDAVKPELE REVRTQLANK KYTELADAFS NGVEDQSDSL
KPVADKLKLQ IQTADHVTRV PNPALGNSPV NNEKVLKALF ADDVTKNHRN TQAVQVGPTT
LVAARAVEYR PATVKKLADV REQVKAKVLA EQSAALAKKA GEEKLAALKQ SNSAEGFGTA
QTLSRQQAQG TPPAALVAIL RADAAKLPVT IGVDLGAQGY ALYRINKVLP PANVDPARRA
ADAQQLTQAA GQADFNAYYE ALKARSKVKI NGSVVDAAKP AASSDDGS
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