| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1601 |
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| Symbol | aceF |
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| ID | 1220434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1720157 |
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| End bp | 1721821 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637237988 |
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| Product | dihydrolipoamide acetyltransferase |
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| Protein accession | NP_519722 |
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| Protein GI | 17546320 |
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| COG category | [C] Energy production and conversion
[I] Lipid transport and metabolism |
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| COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes
[COG0511] Biotin carboxyl carrier protein |
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| TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0105041 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.367645 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCAAG TCGTAGAAAT CAAGGTGCCG GACATCGGCG ACTATAAGGA CGTGCCGGTC
ATCGAGCTGC ACGTCAAGGC GGGCGATACC GTCAGCGCCG AGGATTCGCT GGTCACGCTG
GAGTCGGACA AGGCGACCAT GGATGTGCCG TCGCCCAAGA GCGGCGTCGT CAAGGAAGTG
AAGATCAAGG TGGGCGACGC CGTGTCGGAA GGCTCGCTGG TGCTGCTGCT CGAAGAGCAG
GGCGCCACGG CGGCTTCGGC GCCTCAGGCC GCGCCCGCGC CGGCCCCGGT GGCTGCGGCC
CTCGCGCCGG CTGCACAGGC TCCCGTGTCC GCGCCGGCGG CCCAGCCCGC GGCGGGCGGC
GGCACGATCG AAGTGAAGGT GCCGGACATT GGCGACTACA AGGATGTGCC GGTCATCGAG
ATCAGCGTGA AGGTGGGCGA CAAGGTGGAA GCCGAGCAGT CGCTGATCAC GCTCGAATCC
GACAAGGCCA CGATGGATGT GCCGTCGCCG GCCGCCGGCA CGGTCAAGGA CATCCGCGTG
AAGGTGGGCG ACGCCGTGTC CGAAGGCACG CTGATCGTCG TGCTGGAAGG CGCGGGCGGT
GCGGCCGCAG CTGCGCCGGC TCCGGCGCCC GCGCCGGCGG CTGCCGCCCC GAGCCCGGCG
CCCGCTGTCG CACCCGTCGC AGCCCCGGCC GCCGCGCCTG CCACGTATAC CGCCGACACC
GTCGGCACGA TCGGCAAGGC CGCACACGCC AGCCCCTCGG TGCGCAAGTA CGCGCGCGAG
CTGGGTGTGG ACGTGAACCT GGTCGGCGGC ACCGGCCCGA AGAACCGCAT CACGCAGGAA
GACGTGCAGC GCTACGTCAA GGGCGTGATG ACCGGCCAGG CAGCTGCGCC GGGCAAGGCC
GCCGCTGCGG CGGCACCGGC CGGCGGCGGC GAACTGAACC TGCTGCCGTG GCCGAAGGTC
GACTTCACCA AGTTCGGCCC GGTCGAGCCC AAGCCGCTGT CGCGCATCAA GAAGATCTCC
GGCGCGAACC TGCACCGCAA CTGGGTCATG ATCCCGCACG TCACCAACAA TGACGAAGCG
GACATCACCG AGCTGGAAGC CTTCCGCGTG CAGATGAACA AGGAGCACGA AAAGGCCGGC
GTGAAGTTCA CCATGCTGGC GTTCGTGATC AAGGCGGTCG TGGGCGCGCT CAAGAAGTTC
CCGACCTTCA ACGCCAGCCT GGACGGCGAC AACCTGGTCT TCAAGCAGTA TTACCACATT
GGCTTCGCCG CCGACACGCC CAACGGGCTG GTGGTGCCGG TGATCCGCGA TGCCGACAAA
AAGGGCGTGG TGGACATCGC CCGCGAAATG GCCGAGCTGT CCAAGGCCGC GCGCGAAGGC
AAGCTCAAGC CGGACCAGAT GCAGGGCGGT TGCTTCTCGA TCTCGTCGCT GGGCGGCATC
GGCGGCACGC ACTTCACGCC GATCATCAAT GCGCCGGAAG TGGCCATCCT GGGCCTGTCG
CGCGGCTATC AGAAGCCGGT GTGGGACGGC AAGCAGTTCG TGCCGCGCCT GACGCTGCCG
CTGTCGCTGT CGTACGATCA CCGCGTGATC GACGGCGCGG AGGCCGCACG CTTCAACGCG
TACTTGGCGG CCGTGCTGGC GGACTTCCGC CGCGTGCTGC TGTAA
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| Protein sequence | MSQVVEIKVP DIGDYKDVPV IELHVKAGDT VSAEDSLVTL ESDKATMDVP SPKSGVVKEV
KIKVGDAVSE GSLVLLLEEQ GATAASAPQA APAPAPVAAA LAPAAQAPVS APAAQPAAGG
GTIEVKVPDI GDYKDVPVIE ISVKVGDKVE AEQSLITLES DKATMDVPSP AAGTVKDIRV
KVGDAVSEGT LIVVLEGAGG AAAAAPAPAP APAAAAPSPA PAVAPVAAPA AAPATYTADT
VGTIGKAAHA SPSVRKYARE LGVDVNLVGG TGPKNRITQE DVQRYVKGVM TGQAAAPGKA
AAAAAPAGGG ELNLLPWPKV DFTKFGPVEP KPLSRIKKIS GANLHRNWVM IPHVTNNDEA
DITELEAFRV QMNKEHEKAG VKFTMLAFVI KAVVGALKKF PTFNASLDGD NLVFKQYYHI
GFAADTPNGL VVPVIRDADK KGVVDIAREM AELSKAAREG KLKPDQMQGG CFSISSLGGI
GGTHFTPIIN APEVAILGLS RGYQKPVWDG KQFVPRLTLP LSLSYDHRVI DGAEAARFNA
YLAAVLADFR RVLL
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