Gene RSc1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1560 
Symbol 
ID1220391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1675859 
End bp1676176 
Gene Length318 bp 
Protein Length105 aa 
Translation table11 
GC content65% 
IMG OID637237945 
Productputative transmembrane protein 
Protein accessionNP_519681 
Protein GI17546279 
COG category[S] Function unknown 
COG ID[COG4323] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCACCA CCGACGCGCA CCGCTTCGGC AGCTTCGCCG AGTTCTATCC GTACTACCTC 
GGCGAGCACC GCAACCGCAC CTGCCGGCGC CTGCATTTCG CGGGATCGAC GCTCGCGCTG
GTGTGCCTGA TCCAGCTGGT GTTCACGGGC AGTCTGTGGT GGCTGCTGGC CGCCGCCGTC
AGCGGCTACG CCTTTGCCTG GGTCGGTCAC TTCGCCTTCG AGAAGAACCG CCCCGCCACC
TTCCGCCACC CGATCTACAG CCTCATGGGC GACTGGGTGA TGTACCGCGA CATCTGGATC
GGCAAGATTC CGTTCTGA
 
Protein sequence
MATTDAHRFG SFAEFYPYYL GEHRNRTCRR LHFAGSTLAL VCLIQLVFTG SLWWLLAAAV 
SGYAFAWVGH FAFEKNRPAT FRHPIYSLMG DWVMYRDIWI GKIPF