Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1560 |
Symbol | |
ID | 1220391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1675859 |
End bp | 1676176 |
Gene Length | 318 bp |
Protein Length | 105 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637237945 |
Product | putative transmembrane protein |
Protein accession | NP_519681 |
Protein GI | 17546279 |
COG category | [S] Function unknown |
COG ID | [COG4323] Predicted membrane protein |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCACCA CCGACGCGCA CCGCTTCGGC AGCTTCGCCG AGTTCTATCC GTACTACCTC GGCGAGCACC GCAACCGCAC CTGCCGGCGC CTGCATTTCG CGGGATCGAC GCTCGCGCTG GTGTGCCTGA TCCAGCTGGT GTTCACGGGC AGTCTGTGGT GGCTGCTGGC CGCCGCCGTC AGCGGCTACG CCTTTGCCTG GGTCGGTCAC TTCGCCTTCG AGAAGAACCG CCCCGCCACC TTCCGCCACC CGATCTACAG CCTCATGGGC GACTGGGTGA TGTACCGCGA CATCTGGATC GGCAAGATTC CGTTCTGA
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Protein sequence | MATTDAHRFG SFAEFYPYYL GEHRNRTCRR LHFAGSTLAL VCLIQLVFTG SLWWLLAAAV SGYAFAWVGH FAFEKNRPAT FRHPIYSLMG DWVMYRDIWI GKIPF
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