Gene RSc1489 details

Gene Information

• Locus tag: RSc1489
• ID: 1220318
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 1592504
• End bp: 1592980
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 637237872
• Product: hypothetical protein
• Protein accession: NP_519610
• Protein GI: 17546208
• TIGRFAM ID: [TIGR01635] phage virion morphogenesis (putative tail completion) protein; [TIGR01725] phage protein, HK97 gp10 family

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.358579
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 16
• Fosmid unclonability p-value: 0.861453
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACGATGC GTGAGTTCAG TTCGATCGGA GCGTTCATCG CCCATCTGGC GACGCTCGAG 
GGGCGGCTGG CGCTGGACAG TCGCGCAGCC CTCACCGACG CCGCCAAGCT GGTTGAAGAG 
CAGGCCAAAG CCGAGATCGG CGCGTACCAA CCGGCCGTAG GGCCATTCGC TGCGTGGCCG 
GAGCTGGCCG ACAGCACGAA GGAAGACCGA GCGCGCAAGG GCTACCCGGA AAACGAGCCG 
CTGCTGCGCA CGGGTGACCT GCGGGACAGC ATCTCCCATG AGGTGCATGG GCTGGAGGCC 
ATCGTCGGCT CCACGGAAGA CGTGGCGCTG TATCAGGAGT TGGGAACCCA GCACATCCCG 
CCGCGGCCGT TCCTCGGCAC TGCAGCGGTG GTCAAGGAGA AGGAGATCGT GAAGCTGATC 
GGGGAACAGT TGGCCGGCAC GCTCGCCGGT GTCCGCTACC GGATCAAGGG CGATTAA 

 

Protein sequence

MTMREFSSIG AFIAHLATLE GRLALDSRAA LTDAAKLVEE QAKAEIGAYQ PAVGPFAAWP 
ELADSTKEDR ARKGYPENEP LLRTGDLRDS ISHEVHGLEA IVGSTEDVAL YQELGTQHIP 
PRPFLGTAAV VKEKEIVKLI GEQLAGTLAG VRYRIKGD