| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1434 |
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| Symbol | tISRso10a |
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| ID | 1220263 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1538878 |
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| End bp | 1539246 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637237817 |
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| Product | ISRSO10-transposase ORFA protein |
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| Protein accession | NP_519555 |
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| Protein GI | 17546153 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG2963] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00759092 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGATGGAAG TGTTGACGGG CCCGGAGCGT CGCCGGCGGT GGTCGGTGGA AGAGAAGCTT
GCGATGGTCC GAGAGAGCTT TGAGCCGGGC AAGACGGTCT CGATGGTGGC GCGCCAGCAC
GGCGTGAATC CGAATCAGGT GTTCCAGTGG CGCAAGCTGT ACCAAGACGG GAGCCTGTCG
GCAGTGACCG CGGGCGAGGA AGTGGTGCCG GCCTCGGAGC TGGCCGAAGC GCTCAAACAA
GTCCGTGAGC TGCAGCGCAT GCTCGGCAAG AAGACGATGG AGAACGAGAT TCTTCGCGAA
GCCGTGGAAT ACGGTCGGGC AAAAAAGTGG ATAGCGCGCT CGCCATCGTT GCCGGGGGAC
GACCAGTGA
|
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| Protein sequence | MMEVLTGPER RRRWSVEEKL AMVRESFEPG KTVSMVARQH GVNPNQVFQW RKLYQDGSLS
AVTAGEEVVP ASELAEALKQ VRELQRMLGK KTMENEILRE AVEYGRAKKW IARSPSLPGD
DQ
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