Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1430 |
Symbol | |
ID | 1220254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1529630 |
End bp | 1530208 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637237808 |
Product | hypothetical protein |
Protein accession | NP_519551 |
Protein GI | 17546149 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.011317 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0709181 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGAAAG CGCTTTTGCG ACTCGTTCTG TTTCTGGATG CGGCTGTCGC GCTGTGCGTC GGTCTCGTCC TGCTGGCGTC CCCGCTGTCG TCCGTCTTCG GCGCGCTGCA GGTGCCGCAG CCGGATCCGG CGATGTACGG CCAGTTGCTC GGCGTGACGC TGCTCGGCCT GGCCTGGTTG CTGTGGCACG CCACCGTCAA TGGGCAGTTG ACCACCGCCG TGGCACAGGT GGTCGGCCAT GTGAACCTGG CGGTGGCCGT GCTGGTGATC GCCTGGCTGC TGTTCTTCCA TCTGCCGGTG GACGGCGCGG GCCGCATCTG GCTGCCGACC TTTGCCGCCG TGCTGGCGCT GTTTGCCGCC GTGCAGATTC CGGCCTCGCG CCGCGTGCGC CACACCGAGC GCGAACGGGC CACGAAGGCC CGCGAAGAGG CGGCCGCCAC GCGTGAACGC GAACGCGCGG GCGCCGAGCG CAAGGAACCC GCCTATATGC CGCCGCCGGG CTACGGCCCC GGCACCGAAG TCGACACGAT TGCCGATTCT CTCCCTCCAC AACATGCACG ACAAAGTCCT CATCCTTGA
|
Protein sequence | MMKALLRLVL FLDAAVALCV GLVLLASPLS SVFGALQVPQ PDPAMYGQLL GVTLLGLAWL LWHATVNGQL TTAVAQVVGH VNLAVAVLVI AWLLFFHLPV DGAGRIWLPT FAAVLALFAA VQIPASRRVR HTERERATKA REEAAATRER ERAGAERKEP AYMPPPGYGP GTEVDTIADS LPPQHARQSP HP
|
| |