| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1334 |
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| Symbol | |
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| ID | 1220158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1418651 |
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| End bp | 1420828 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637237712 |
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| Product | D--3-hydroxybutyrate oligomer hydrolase lipoprotein transmembrane |
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| Protein accession | NP_519455 |
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| Protein GI | 17546053 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.486001 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACCA CCCGAGACGC GAACCGTTTG CGTCAGCGCG CATCGTTGAG CGGGCTGGCG
CTGGCCGGCA GCCTTGGCCT CGCGGGCTGC GGCGTGCTGG GCCTGGCCGG CTGCGGCGGC
GACAACAACA GCAGCACGTC CGGCAACGTG AAACCGTCGT TCGTCGGCAC CGTCACGGTG
ACCCGCCATG ACGGCGCCAA CGATGATCTG CTGACCGCCG GGCTGGGCGC GGCCGGGCTG
GCTTCCGCTT CGGCGCCGTC GGTCGCCACG CCGACCGCGC CCACCGCGGC CGAGCTGCGC
CGCCTGGACA TCTACGCCAG CTACCGGGCG CTGGTCGATA CCGCGGCCAA CGGCGGCTAC
GGCACGCTGT ACGGCCCCAG CGTCGACGTC AACGGCAACG CCACCTCGGG CAGCGGCATG
GTGCCGGGCG TGGAGTACAT CGCGTATTCC GACGACGGCA CCGGCCAGCA GAACGTGGTG
CTGCTGGTGC AGATTCCCGA CGCGTTCGAC CCCGCGAATC CCTGCATCAT CACGGCGACT
TCGTCGGGCT CGCGCGGCAT CTACGGCGCC ATCTCCACCG GCGAGTGGGG GCTCAAGCAC
AAGTGCGCCG TCGCCTATAC CGACAAGGGC ACCGGGGCCG GCCCGCACGA TCTCGCCACC
GACACGGTGC CGCTGCAGGA CGGCACGCGC ACCACGCGCC TGGCCGCCGG CCGCACGGCG
CAGTTTGCCG CGCCGCTCAC CGACAGCCAA CTGGCCGCGT TCAATGCGGC CACGCCCAAC
CGGCTGGCAT TCAAGCACGC GCATTCGCAG CGCAACCCCG AGAAGGACTG GGGCCTGTTC
ACGCTGCAGG CCGTGCAGTT CGCCTTCTGG GCCATCAACG ACAAGCTGGG CGCTGCCGGC
ATGCCCGCCG GCAGCCCGTT GCCGGTGCGG CGCGACAACA CCATCGTGAT CGCGTCGAGC
ATCTCCAACG GCGGCGGCGC GGCCATCGCG GCGGCGGAGC AGGATACGGC GGGCTGGATC
GACGGCGTGG CCGTGGGCGA GCCCGGGCTG AACCTGCCGC CGTCGGCCAA CGTGCAGGTG
GCGCGCGGCG GCGTGACGCT GCCGGTGAGC GGCAAGCCGC TGTTCGACTA CGTGAGCTAT
GCCAATCTGT TCCGGCTTTG CGCTGCCTCG TCGTCGGGCG TGTCGGCTGC GCCCACGCAA
GCGTTCTTTG CCGGCGCGGT CGGCTGGCCG GCCAGTGTCC AGGCCAACCG CTGCGCCGCG
CTGCGCGCCA ATGGCCTGCT GTCGTCGGCC ACGGCAGCCG CGCAAGCCGA CGAGGCGCTG
CAGAAGCTGC ACGCCTTTGG CTGGGAGCCG GAGTCGGACC TGGTGCATGC GTCCATGTCG
TATTTCGAGA TCGATCCGTC GGTGGCCGTC ACCTTCGGCA ATGCGCTGGC GCGCGCCAGC
GTGCTCGACA ACCTGTGCAA CTTCAGCTTC GCCGCGGTGG ACAGCGCGTT CCATCCGACC
GCGGTGAATG CCACTTCGCT GGCGCAGATG GCGGCGCTCG GCAATGGCAT TCCGCCGACG
TCCGGCGTGC AGCTGATCAA CAACCTGGCG CAGGGCGGCC CGACGCAGAG CAAGCAGTCG
GTGGACGGGT CGGGCGCGCT GGCGGCCAAT CTCGATGGCG CGCTGTGCCT GCGCAACCTG
CTGACCGGCG GCGATGCCGC CTCGCTGGCC TTGCAGGCCG GCATCGCGCA GACGCTGCGC
ACGGGCAACC TGCACGGCAA GCCGGCGCTG ATCGTGCAGG GCCGCAACGA TGCGCTGCTG
CCGGTCAATC ACGGTGCGCG GCCCTATCTG GGGCTCAATG CCCAGACGGA CAGCAGCAGC
CGGCTGTCGT ACATCGAAGT GATGAATGCG CAGCATTTCG ATGGCTTCAT TGATCTGGTG
CCGGGCTACG ACACGCTGTT CGTGCCGCTG GTGCTCTATG AGCAACGCGC GCTCGATGCG
GTGTTCGCCA ACCTGAAGAA CGGCACGCCG CTGCCGCCGT CGCAGGTGGT GCGCACCACG
CCGCGGGGCG GCACGGCGGG GGCCGCGCCG GCCATCACGG CGGCCAACGT GCCGAATTTC
ACGATGACGC CGGCGGCGGG CGATCGCATC GGTGTGAGCG TGTCGGGCGG CGTGGCGACG
GTGTCGGTGC CGAACTGA
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| Protein sequence | MNTTRDANRL RQRASLSGLA LAGSLGLAGC GVLGLAGCGG DNNSSTSGNV KPSFVGTVTV
TRHDGANDDL LTAGLGAAGL ASASAPSVAT PTAPTAAELR RLDIYASYRA LVDTAANGGY
GTLYGPSVDV NGNATSGSGM VPGVEYIAYS DDGTGQQNVV LLVQIPDAFD PANPCIITAT
SSGSRGIYGA ISTGEWGLKH KCAVAYTDKG TGAGPHDLAT DTVPLQDGTR TTRLAAGRTA
QFAAPLTDSQ LAAFNAATPN RLAFKHAHSQ RNPEKDWGLF TLQAVQFAFW AINDKLGAAG
MPAGSPLPVR RDNTIVIASS ISNGGGAAIA AAEQDTAGWI DGVAVGEPGL NLPPSANVQV
ARGGVTLPVS GKPLFDYVSY ANLFRLCAAS SSGVSAAPTQ AFFAGAVGWP ASVQANRCAA
LRANGLLSSA TAAAQADEAL QKLHAFGWEP ESDLVHASMS YFEIDPSVAV TFGNALARAS
VLDNLCNFSF AAVDSAFHPT AVNATSLAQM AALGNGIPPT SGVQLINNLA QGGPTQSKQS
VDGSGALAAN LDGALCLRNL LTGGDAASLA LQAGIAQTLR TGNLHGKPAL IVQGRNDALL
PVNHGARPYL GLNAQTDSSS RLSYIEVMNA QHFDGFIDLV PGYDTLFVPL VLYEQRALDA
VFANLKNGTP LPPSQVVRTT PRGGTAGAAP AITAANVPNF TMTPAAGDRI GVSVSGGVAT
VSVPN
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