Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1301 |
Symbol | |
ID | 1220125 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1388120 |
End bp | 1388509 |
Gene Length | 390 bp |
Protein Length | 129 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237679 |
Product | hypothetical protein |
Protein accession | NP_519422 |
Protein GI | 17546020 |
COG category | [S] Function unknown |
COG ID | [COG4994] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.540321 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAACCAC ACCTGGATAC CGATCCCGCC CTGCTCGACG TGCTCGAGGA ACTGCGGCGG CTGGAACCCA TCTTCCACCG CCCGGAACAC GGCACCCGCC GCGAGGATTT CGAGCGGATG ACCGAAGACG ATTTCTGGGA AGTCGGCGCA TCGGGCCAAC GCTACAGCCG CAGCTACGTG CTCGGCGTGC TCGATGCCCG GCACGGCCAT ATCGGCGACG CATTCTGGCA AACGAGCGAC CTGCGCTGCC AGGCCATCGC ACCCGACAAC TATCTGCTGA CCTATACGCT GGTCCAATCG ACCCGGACAA CGCGGCGCGC AACGATCTGG CGGCGCACCG CCGAAGGCTG GAAGATCGTC TACCACCAGG GAACGGTGGT AGCTGTGTAG
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Protein sequence | MEPHLDTDPA LLDVLEELRR LEPIFHRPEH GTRREDFERM TEDDFWEVGA SGQRYSRSYV LGVLDARHGH IGDAFWQTSD LRCQAIAPDN YLLTYTLVQS TRTTRRATIW RRTAEGWKIV YHQGTVVAV
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