Gene RSc1301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1301 
Symbol 
ID1220125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1388120 
End bp1388509 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content64% 
IMG OID637237679 
Producthypothetical protein 
Protein accessionNP_519422 
Protein GI17546020 
COG category[S] Function unknown 
COG ID[COG4994] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.540321 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCAC ACCTGGATAC CGATCCCGCC CTGCTCGACG TGCTCGAGGA ACTGCGGCGG 
CTGGAACCCA TCTTCCACCG CCCGGAACAC GGCACCCGCC GCGAGGATTT CGAGCGGATG
ACCGAAGACG ATTTCTGGGA AGTCGGCGCA TCGGGCCAAC GCTACAGCCG CAGCTACGTG
CTCGGCGTGC TCGATGCCCG GCACGGCCAT ATCGGCGACG CATTCTGGCA AACGAGCGAC
CTGCGCTGCC AGGCCATCGC ACCCGACAAC TATCTGCTGA CCTATACGCT GGTCCAATCG
ACCCGGACAA CGCGGCGCGC AACGATCTGG CGGCGCACCG CCGAAGGCTG GAAGATCGTC
TACCACCAGG GAACGGTGGT AGCTGTGTAG
 
Protein sequence
MEPHLDTDPA LLDVLEELRR LEPIFHRPEH GTRREDFERM TEDDFWEVGA SGQRYSRSYV 
LGVLDARHGH IGDAFWQTSD LRCQAIAPDN YLLTYTLVQS TRTTRRATIW RRTAEGWKIV
YHQGTVVAV