Gene RSc1297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1297 
Symbol 
ID1220120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1383423 
End bp1383638 
Gene Length216 bp 
Protein Length71 aa 
Translation table11 
GC content65% 
IMG OID637237674 
Productputative transmembrane protein 
Protein accessionNP_519418 
Protein GI17546016 
COG category[I] Lipid transport and metabolism 
COG ID[COG3000] Sterol desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.715305 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGTTTG CATCGCGCCG CCATCGCGTG CGCTGGATGT GGGCGTCGCA CGTGACGCAT 
CACGCTTCGG AAGGGATGCA CTTCTCGACC GCGCTCCACC AGAGCCTGAC CCACCCCATC
TCGGGGATGT GGCTGTTCTG GCTTCCGCTG GCATGGATCG GCTTCACACC GGACTGGGTG
ATTGCGGTGG CGCCCGGGTT CGAATCCCCA CCCTGA
 
Protein sequence
MRFASRRHRV RWMWASHVTH HASEGMHFST ALHQSLTHPI SGMWLFWLPL AWIGFTPDWV 
IAVAPGFESP P