Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc1266 |
Symbol | ugpE |
ID | 1220089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 1345603 |
End bp | 1346451 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237643 |
Product | SN-glycerol-3-phosphate transmembrane ABC transporter protein |
Protein accession | NP_519387 |
Protein GI | 17545985 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.75502 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAC GCCGCCCGTT CCTGGATGTC CTGACCCACC TCGTGCTGAT CCTGGGCGTG GTGGTGGTCG CCTTTCCGGT CTACGTGGTC TTCGTCGCGT CCTCGCTGAC GGCCGAGGAC GTGCTGCAGG CGCCGATGAC GCTGATCCCC GGCCCGCACC TGATCGACAA CTACCGCGAG GTGCTCGCGC ACGGCATGGG CAACGCCGCC ACGCCGGTCG GCACCATGCT GATGAACAGC CTGATCATGG CGCTGGGCAT CTCGCTGGGC AAGATCGCGA TCTCCATCAT CTCGGCCTTC GCCATCGTCT ATTTCCGCTT TCCGCTGCGC AAGACCTTCT TCTGGCTGAT CTTCGTCACG CTGATGCTGC CGGTGGAGGT GCGCATCCTG CCGACCTACA AGGTGGTGTC GGACCTCGGC ATGCTCAACA GCTACTTCGG CCTGACCATC CCGATCATCG CCTCGGCCAC CGCCACGTTC CTGTTCCGCC AGTTCTTCCT GACCATTCCC GACGAGCTCG CCGAGGCCGC GCGCATCGAC GGCGCCGGGC CGCTCAAGTT CTTCTGGGAC GTGGTGCTGC CGCTGTCGCG CACCAGCATC GCGGCGCTGT TCGTGATCCA GTTCATCTAC GGCTGGAACC AGTACCTGTG GCCGCTGCTG GTCACCACCG AGCGGGACAT GACGCCGATC GTGCTGGGCG TCACGCAGAT GATCTCGCGT TCGGGCGATT CCGCCACCGA CTGGAACCTG CTGATGGCCA CCGTGATGCT GGCCATGGTG CCGCCCGTGC TGGTGGTGAT CGGCATGCAG CGGTGGTTCG TGAAGGGCCT GGTGGAAACC GAAAAATAG
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Protein sequence | MIERRPFLDV LTHLVLILGV VVVAFPVYVV FVASSLTAED VLQAPMTLIP GPHLIDNYRE VLAHGMGNAA TPVGTMLMNS LIMALGISLG KIAISIISAF AIVYFRFPLR KTFFWLIFVT LMLPVEVRIL PTYKVVSDLG MLNSYFGLTI PIIASATATF LFRQFFLTIP DELAEAARID GAGPLKFFWD VVLPLSRTSI AALFVIQFIY GWNQYLWPLL VTTERDMTPI VLGVTQMISR SGDSATDWNL LMATVMLAMV PPVLVVIGMQ RWFVKGLVET EK
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