| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1165 |
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| Symbol | ppiA |
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| ID | 1219980 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 1223087 |
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| End bp | 1223659 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637237534 |
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| Product | peptidyl-prolyl cis-trans isomerase A |
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| Protein accession | NP_519286 |
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| Protein GI | 17545884 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.133309 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.672671 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCCGTA TCCGCTCCCT CTTTGCCGGG CTCGTGTGTG CACTGGCCGT TTCCGTCAGC
GCGGCCGCCG CGCCGGCCCC GCGCGTGCAG TTCAAGACGT CGATGGGCGA CTTCACCGTC
GAGGTCTATC CGGACAAGGC GCCCAAGACC GTCGCCAACT TCCTGCAGTA CGTGAAGGAC
GGCTTCTACA AGGGCACCAT CTTCCACCGC GTGATGGACG GTTTCATGAT CCAGGGCGGC
GGCTTCACGC CCGACATGAA GCAGAAGGAC ACGCGCGCGC CCGTCGAGAT CGAATCGAAG
AACGGCCTGA AGAACGACAA GTACACCATC GCCATGGCGC GCACCATGGA CCCGAACTCC
GCCACCGCCC AGTTCTACGT CAACGTGGTC AATAACGACA TGCTGAACTA CCCGGGCCAG
GACGGCTACG GCTACACCGT GTTCGGCAAG GTCGTCGAAG GCACCGCCAC CATCGACAAG
ATCAAGGGCG TGGAGACCAC CAGCAAGCTC CCGCACCAAA ACGTGCCCGT CACGCCGATC
GTGATCGAAT CGGTCACCCT CGTCACCAAG TAA
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| Protein sequence | MLRIRSLFAG LVCALAVSVS AAAAPAPRVQ FKTSMGDFTV EVYPDKAPKT VANFLQYVKD
GFYKGTIFHR VMDGFMIQGG GFTPDMKQKD TRAPVEIESK NGLKNDKYTI AMARTMDPNS
ATAQFYVNVV NNDMLNYPGQ DGYGYTVFGK VVEGTATIDK IKGVETTSKL PHQNVPVTPI
VIESVTLVTK
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