Gene RSc1132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc1132 
Symbol 
ID1219947 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp1189797 
End bp1190813 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content68% 
IMG OID637237501 
Productputative redox regulated molecular chaperone heat-shock-like protein 
Protein accessionNP_519253 
Protein GI17545851 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1281] Disulfide bond chaperones of the HSP33 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACG AGCTGAAGAA ATTCGTATTC GACGCCGCCC CGGTGCGCGG TGAACTGGTG 
CGGCTGGAGG GAACCTGGCA GGAAGTCCTG CGCCGCCGCC ACTACCCCGC CCCGGTGCGC
ACGCTGCTGG GCGGGATGAT GGCCGCCGCC GCGCTGCTGT CGGCCAACCT GAAGTTCAAC
GGCGCGCTGA TCATGCAGCT GCACGGTGAC GGGCCGCTGC GCATGCTGGT GGTGGAGTGC
AATTCCGACC TGTCGATGCG CGCCACCGCC AAGCTGGTCG AAGGCGCCCA GATCGCGGAC
GACGCCACGC TGGCGTCGCT GGTCAACCAG CACGGCCACG GCCGCTTCGC CATCACGCTG
GATCCGCAGG ACAAACTGCC CGGCCAGCAG CCCTACCAGG GCATCGTCCC GCTGTCCGAC
GAGCATGGCC CGCTCACCAG CATGACCGCC GTGCTGGAGC ACTACATGCA GACCTCCGAG
CAGCTCGACA CGCGGCTGTG GCTGGCCGCC GACGACAAGA TCGCCTCGGG CATGCTACTG
CAGCGACTGC CGTCTTACGG CGGCGCGATG GAAGGCCACC CCGGCCATGG GCCCGCGGAA
GTAGGCGAGA CCGGCCAGCC GCTGCGCGAA GACGTGCACG GCCAGGACCT CGACACCTGG
GAGCGCGTCT GCCAGCTCGG CGCGACGCTG CGCCGGGACG AACTGCTGGA GCAGCCCGTC
GACACGCTCA TCAAGCGGCT CTACTGGGAA GAGATGGAGC ACGCCGGCAT CCGCATGTTC
GAGCCGGTCC TGCCGCGTTT CCGCTGCTCG TGCACGCGGC TGCGGGTCGG CGCGATGCTG
CGCACGCTGG GCCAGGAAGA GATCGACGAC ATCCTGCAGG AGCGCGGCGG CAAGGTGGAA
ATCGATTGCG AGTTCTGCGG CCAGCACTAC GCGTTCGACG CTGTCGATTG TGCGCAGCTG
TTCGCGCAGG ACACCGTGGT GCAGGGCGTG CAGAGCGCCT CCGACCAGCG TCACTGA
 
Protein sequence
MTDELKKFVF DAAPVRGELV RLEGTWQEVL RRRHYPAPVR TLLGGMMAAA ALLSANLKFN 
GALIMQLHGD GPLRMLVVEC NSDLSMRATA KLVEGAQIAD DATLASLVNQ HGHGRFAITL
DPQDKLPGQQ PYQGIVPLSD EHGPLTSMTA VLEHYMQTSE QLDTRLWLAA DDKIASGMLL
QRLPSYGGAM EGHPGHGPAE VGETGQPLRE DVHGQDLDTW ERVCQLGATL RRDELLEQPV
DTLIKRLYWE EMEHAGIRMF EPVLPRFRCS CTRLRVGAML RTLGQEEIDD ILQERGGKVE
IDCEFCGQHY AFDAVDCAQL FAQDTVVQGV QSASDQRH