| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc1060 |
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| Symbol | lepA |
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| ID | 1219869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 1113358 |
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| End bp | 1115154 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637237423 |
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| Product | GTP-binding protein LepA |
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| Protein accession | NP_519181 |
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| Protein GI | 17545779 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0481] Membrane GTPase LepA |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR01393] GTP-binding protein LepA |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.203517 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.568837 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAATA TCCGCAATTT TTCGATCATC GCCCACATCG ACCACGGCAA ATCGACGCTG
GCCGATCGCA TCATCCAGTT GTGCGGTGGG CTTTCCGACC GCGAGATGGA AGCCCAGGTG
CTGGACTCGA TGGATATCGA GAAGGAGCGC GGCATCACCA TCAAGGCGCA GACCGCCGCG
CTGTCCTACA AGGCTCGTGA CGGCAAGGTC TACAACCTCA ACCTGATCGA CACGCCGGGG
CACGTCGACT TCAGCTACGA AGTCAGCCGT TCGCTGTCCG CGTGCGAGGG TGCGCTGCTG
GTGGTCGATG CTTCGCAGGG TGTGGAGGCG CAGACGGTCG CCAACTGCTA CACGGCCATC
GAGCTGGGCG TCGAGGTGGT GCCGGTGCTC AACAAGATCG ACCTGCCGGC GGCCGACCCG
GACAGTGCGA TCCAGGAAAT CGAGGACGTG ATCGGCATCG ACGCGCAGGA TGCGACGCGC
TGCTCGGCCA AGACCGGCGT GGGTGTGCCC GATGTGCTGG AAGCCCTGAT CGCCAAGGTG
CCAGCGCCCA AGGGCGATCC CGATGCGCCG CTGCAGGCGC TGATCATCGA CTCGTGGTTC
GACAACTACG TCGGCGTGGT GATGCTGGTG CGCGTGGTCA ACGGCACGCT GCGCGCCAAG
GACAAGGTGC TGCTGATGGC CACGGGCGCG CAGCACCTGG TGGAGCAGGT GGGTGTGTTC
TCGCCGAAGT CGGTGCCGCG TGAATCGCTG TCGGCGGGGC AGGTGGGCTT CGTCATCGCC
GGTATCAAGG AACTGAAGGC CGCCAAGGTG GGCGACACCA TCACCCACGT GGTGCCGCGC
AAGGCCGACG CGCCGCTGCC GGGCTTCAAG GAAGTCAAGC CGCAGGTGTT CGCGGGCCTG
TATCCGGTCG AGGCCAACCA GTACGAGGCG CTGCGCGAAT CGCTGGAGAA GCTGCAGCTG
AACGACGCGT CGCTGCAGTT CGAGCCGGAA GTGTCGCAGG CGCTGGGCTT CGGTTTCCGC
TGCGGCTTCC TGGGCCTGCT GCACATGGAG ATCGTGCAGG AGCGCCTGGA GCGCGAGTTC
GATATGGACC TGATCACCAC CGCGCCGACG GTGGTCTACC AGGTCATGCA GCGCGATGGC
ACGACGGTCC AGGTGGAAAA CCCTGCCAAG ATGCCCGATC CGAGCAAGAT CGAGTCGATC
CTCGAGCCGA TCGTCACGGT CAACCTGTAC ATGCCGCAGG AATACGTGGG CGCCGTGATC
ACGCTGTGCG AGCAGAAGCG CGGTTCGCAG ATCAACATGA GCTACCACGG CCGCCAGGTC
CAGCTCACGT ACGAAATTCC GATGGGCGAG ATCGTGCTGG ACTTCTTCGA CCGGCTGAAG
TCCGTCTCGC GCGGCTACGC GTCGATGGAC TACGAGTTCA AGGAATACCG TCCGTCCGAC
GTGGTCAAGG TCGACATGCT GATCAACGGC GACAAGGTGG ACGCGCTGTC GATCATCGTC
CACCGCTCCA ACAGCGCGTA CCGCGGCCGC GAAGTGGCCG CCAAGATGCG CGAGATCATT
CCGCGCCAGA TGTACGACGT GGCCATCCAG GCGGCCATCG GCAGCAACGT GATCGCGCGC
GAGAACGTCA AGGCGCTGCG CAAGAACGTG CTGGCCAAGT GCTACGGCGG CGACATCAGC
CGCAAGAAGA AGCTTCTCGA GAAGCAGAAG GAGGGCAAGA AGCGCATGAA GCAGGTGGGC
AGCGTTGAAA TCCCGCAGGA GGCTTTCCTG GCCATCCTGC GCGTCGAAGA AAAATAA
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| Protein sequence | MDNIRNFSII AHIDHGKSTL ADRIIQLCGG LSDREMEAQV LDSMDIEKER GITIKAQTAA
LSYKARDGKV YNLNLIDTPG HVDFSYEVSR SLSACEGALL VVDASQGVEA QTVANCYTAI
ELGVEVVPVL NKIDLPAADP DSAIQEIEDV IGIDAQDATR CSAKTGVGVP DVLEALIAKV
PAPKGDPDAP LQALIIDSWF DNYVGVVMLV RVVNGTLRAK DKVLLMATGA QHLVEQVGVF
SPKSVPRESL SAGQVGFVIA GIKELKAAKV GDTITHVVPR KADAPLPGFK EVKPQVFAGL
YPVEANQYEA LRESLEKLQL NDASLQFEPE VSQALGFGFR CGFLGLLHME IVQERLEREF
DMDLITTAPT VVYQVMQRDG TTVQVENPAK MPDPSKIESI LEPIVTVNLY MPQEYVGAVI
TLCEQKRGSQ INMSYHGRQV QLTYEIPMGE IVLDFFDRLK SVSRGYASMD YEFKEYRPSD
VVKVDMLING DKVDALSIIV HRSNSAYRGR EVAAKMREII PRQMYDVAIQ AAIGSNVIAR
ENVKALRKNV LAKCYGGDIS RKKKLLEKQK EGKKRMKQVG SVEIPQEAFL AILRVEEK
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