| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0994 |
|---|
| Symbol | |
|---|
| ID | 1219803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 1045507 |
|---|
| End bp | 1046265 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637237357 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_519115 |
|---|
| Protein GI | 17545713 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4700] Uncharacterized protein conserved in bacteria containing a divergent form of TPR repeats |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.340196 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.391943 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTTTC TCGGAATCGG TTTCCACGTC ATCGTCGCGC TGTTCTTTGC GGTGCATGCG
GTGCGCACGC ACCAGAACCT GTACTGGCTG TTCATCCTGT TCGCCTTTCC GCTGCTGGGC
AGCGTGGCGT ACTTCTTCGC GATCTATCTG CCCGAGCTGC GGTATTCGCG CGGCGCCCGC
GTGGCCACCC GCGCCGTCAG CCAGATGATC GACCCGAACC GGGCGGTGCG CGAGGCGCGC
AACGACTTCG ATCGCGCGCC GACCGTGCAG CACCGGCTGC GCCTGGGCGA GGCCCTGCTG
GAAGCCGGCG ACGCCAAGGA AGCCCGCCAG CACTTCGAGC AGGCCGCCAC CGGCCCGTTC
GCCGGCGACC AGGCCGTGCT GCTGGGTCTG GCCCGTGCGC AGTTCGCCAC CGGCGATGCG
GCGATGGCCG CGACGACCCT GGACACCCTG TTCGAGGCAC ATCGCCCCGC GCGCCGACAA
CCCGATCCCA CGCTGCTGTA TGCGCGGGCG CTGGCCACCG GCGGTGCGCC CGCCGCGCGC
GCGGCCTTCG AGCAGGCGCT CGCCTGCGCC AACGATGCCG CCGCCCGCTG CCTGTATGGC
GAGTGGCTGC TCGCCCAGGG CAATGCCGCC GACAAGGCGC GCGCCCGCGA TCTGTTCGAC
GATATCCTGC GCGACGCCAA GCACTGGACG CGCTACGCCA AAGACCATAA CCGCGAATGG
CTGCAGCGCG CCCAGGCCGC CCAGTCTTCT TTCCGTTGA
|
|---|
| Protein sequence | MPFLGIGFHV IVALFFAVHA VRTHQNLYWL FILFAFPLLG SVAYFFAIYL PELRYSRGAR
VATRAVSQMI DPNRAVREAR NDFDRAPTVQ HRLRLGEALL EAGDAKEARQ HFEQAATGPF
AGDQAVLLGL ARAQFATGDA AMAATTLDTL FEAHRPARRQ PDPTLLYARA LATGGAPAAR
AAFEQALACA NDAAARCLYG EWLLAQGNAA DKARARDLFD DILRDAKHWT RYAKDHNREW
LQRAQAAQSS FR
|
|---|
| |