Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0987 |
Symbol | |
ID | 1219796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 1037956 |
End bp | 1038897 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 637237350 |
Product | hypothetical protein |
Protein accession | NP_519108 |
Protein GI | 17545706 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0222802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0533863 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGGT CCACCGCCCT GCCGCTCGGC CATGCGCCCG ACCACGCCGA ACGCCGCGGC CTGCTGCTCG GCTTCATCGG CGTGACGATC TTCAGCCAGA CGCTGCCCTT CACGCGGATG GCGGTGGCCG AGCTGGACGC CACCTTCGTC GCGCTGGCCC ACGCGGTGCT GGCCAGCCTG CTCGCGCTGG CGCTGCTGGC CGCGACCGGC GCGCTGCGCG CTGCGCGCCG CCCGCGCGGC GGCCAGTGGG GCAGGCTGGC CGTCACGGCG GCGGGCGTGG TGGTGGGCTT TCCGCTGTTC TCGTCGCTGG CGATGCGCGA TGTGCCGGCC GCGCACGGTG CCATCATCAC CGGCCTGCTG CCGCTGGCGA CCGCCCTCTT TGCCGCGTGG TTCGGGCGCG AGCGGCCGTC GCCATGGTTC TGGGCGTGCG CGCTGGCCGG CAGCGTGCTG GTGGTGTCAT TCGCGCTGCT GCGCGGCGCC GGCACCCTGC ACCGCGCCGA CTGGCTGCTG TTCGCCGCCA TGGTGGCGGG CGCCCTCGGC TACGCGGTGG GCGGCAAGCT TTCGCGCGAG CTGGGCGGCA CGCAGACGAT CGCCTGGGCG CTGGTGGTGT CGCTGCCTGC GCTGCTGCCG GTGGTCGGCG CCCTGGCCTG GCTGCCGGGC ACACACCAGG CCGCGGCGCT CGCGCAGGCA TCCGGCCACG CATGGCTGGG GCTGGCCTAC GTGTCGGCCT TCTCCATGTT CGTCGGCTTC CTGTTCTGGT ATTCGGGGCT GGCCGCGGGC GGGGTCGCGC GGGTCGGCCA GATACAATTG CTGCAGCCGT TCATGACGCT GATCGGCGGC TGGCTCCTGC TGGGCGAGCC GCTCGATGCG CCGACGATGC TGTTCGCCCT GGCCGTGATC GCCGTGGTCG GCCTCGGCCG GCGGACCGCC GTGCGGCGAT AG
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Protein sequence | MTRSTALPLG HAPDHAERRG LLLGFIGVTI FSQTLPFTRM AVAELDATFV ALAHAVLASL LALALLAATG ALRAARRPRG GQWGRLAVTA AGVVVGFPLF SSLAMRDVPA AHGAIITGLL PLATALFAAW FGRERPSPWF WACALAGSVL VVSFALLRGA GTLHRADWLL FAAMVAGALG YAVGGKLSRE LGGTQTIAWA LVVSLPALLP VVGALAWLPG THQAAALAQA SGHAWLGLAY VSAFSMFVGF LFWYSGLAAG GVARVGQIQL LQPFMTLIGG WLLLGEPLDA PTMLFALAVI AVVGLGRRTA VRR
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