| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0921 |
|---|
| Symbol | |
|---|
| ID | 1219729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 972826 |
|---|
| End bp | 973479 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637237283 |
|---|
| Product | transmembrane ABC transporter protein |
|---|
| Protein accession | NP_519042 |
|---|
| Protein GI | 17545640 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2011] ABC-type metal ion transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.773713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGTCTG ACCTGACCGA TCTGTTCCTG CCGGCCTTCG GCGAAACGCT CGCCATGGTG
GGCGTGTCCG GCGGCATCGG TGCGCTGTTC GGCGTGCCGC TGGGCGTGCT GCTGTACCTG
ACCGGGCCGG GCGGCGTGCT GTCGGCGCCG GCGTTCAACC GCATCGCCGG GCTGATCGTC
AACGCGGTCC GTTCGGTGCC GTTCATCATC CTGCTGGTGG CGGTGATTCC GTTCACGCGC
CTGCTGGCGG GGTCCTCGAT CGGTACGGCG GCGGCCACCG TGCCGCTGAC GCTCGCGGCG
ATCCCGTTCA TCGCGCGCCT GGTGGAGACC GCGCTGCGCG AAGTGGACCG CGGCCTGATC
GAAGCGGCCC AGTCGATGGG CGCGACCACC GGCCAGCTGG TCTACAAGGT GCTGCTGCCC
GAAGCGATGC CGGGCATCCT CGCCGGCCTG ACCATCACCT TCGTCAGCCT GGTCGGCTAC
TCGGCCATGG CCGGCACCAT CGGCGGCGGC GGCCTGGGCG ATCTGGGCAT CCGCTACGGC
TACCAGCGCT ACGAATCGGA CATCATGCTG GCGGTGGTCG TCATCCTGAT CGTCTTTGTG
CAGGCGGTGC AATCGACCGG CGATTGGCTG GTCCGTCGCC TGAGCCACCG TTAA
|
|---|
| Protein sequence | MWSDLTDLFL PAFGETLAMV GVSGGIGALF GVPLGVLLYL TGPGGVLSAP AFNRIAGLIV
NAVRSVPFII LLVAVIPFTR LLAGSSIGTA AATVPLTLAA IPFIARLVET ALREVDRGLI
EAAQSMGATT GQLVYKVLLP EAMPGILAGL TITFVSLVGY SAMAGTIGGG GLGDLGIRYG
YQRYESDIML AVVVILIVFV QAVQSTGDWL VRRLSHR
|
|---|
| |