Gene RSc0906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0906 
SymboltyrA 
ID1219714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp957523 
End bp958419 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID637237268 
Productputative prephenate dehydrogenase oxidoreductase protein 
Protein accessionNP_519027 
Protein GI17545625 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0287] Prephenate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCTCTT CTTTTTCCAG TTCCCGGTTG GTGATCGTGG GTGTCGGCCT GATCGGCGGT 
TCGCTGGCGC TGGCGTTGCG CCGCGCGGGC GTGGTCGGGC AGGTCATCGG CGTCGGGCGG
TCGGGGGCGT CGCTGGAGGC GGCGGTCCGC CTGGGGGTGA TCGACGAGGC GTTGCCGATG
GAAGCGGCGG TGCGCGGCGC CGACATGGTC GTGCTGTGCG CACCCGTGGC GCAGACGCTG
CCGCTGCTGC TCGCGATGCA GCCGCACCTG GGGCCGGACA CCATCGTCAC CGATGCCGGC
AGCACCAAGT CCGACGTCAT CATGGCGGCC AAGACGGCGC TGGGCGACCA GGTCAGCCAG
TTCGTGCCGG CGCACCCGAT CGCCGGGCGC GAGCTCAATG GCGTCGAGGC GGCGCTGGCC
GATCTCTATG TCGGCAAGAA GACCGTGCTG TGCCCGCTGC AGGAAAACCG CCGCGCCGAC
GTCGCCCGCG TGCAGGCGAT GTGGGATGCC GCGGGGGCGT ATTGCCATGT GATGTCGGCT
GTGCAGCACG ATGCCGTGTT TGCCGCGGTG AGCCATCTGC CGCATGTGCT TTCGTACGCG
CTGGTTGCGC AGATCATCAA TGCGGAGGAC GCCGCGCTCA AGCTCGATTT CGCCGGCGGC
GGCTTCCGCG ATTTCACCCG CATTGCCGCG TCGTCGCCCG AGATGTGGCG CGACATCTGC
CTGTCGAACC GCGAGGCGCT GCTGCGCGAG CTGACCACCT ATGAAGCCGT GGTGGGCCGC
CTGAAGGCGA TGATCGCCGA GCGCGACGCT GAAGCGCTCG AGCGCGTGTT CCGCCGCGCC
AGCGAAGCGC GCCTGGCCTG GCCGCAGCGC GCGGCCTCCG CCACACAACC CGAATAA
 
Protein sequence
MASSFSSSRL VIVGVGLIGG SLALALRRAG VVGQVIGVGR SGASLEAAVR LGVIDEALPM 
EAAVRGADMV VLCAPVAQTL PLLLAMQPHL GPDTIVTDAG STKSDVIMAA KTALGDQVSQ
FVPAHPIAGR ELNGVEAALA DLYVGKKTVL CPLQENRRAD VARVQAMWDA AGAYCHVMSA
VQHDAVFAAV SHLPHVLSYA LVAQIINAED AALKLDFAGG GFRDFTRIAA SSPEMWRDIC
LSNREALLRE LTTYEAVVGR LKAMIAERDA EALERVFRRA SEARLAWPQR AASATQPE