Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0903 |
Symbol | serC |
ID | 1219711 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 953903 |
End bp | 955039 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637237265 |
Product | phosphoserine aminotransferase |
Protein accession | NP_519024 |
Protein GI | 17545622 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG1932] Phosphoserine aminotransferase |
TIGRFAM ID | [TIGR01364] phosphoserine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.262776 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCAAG CGGATCGAGC TCTTCAAGCC AGCCAGGCGC GTGTCTACAA CTTTTCGGCG GGGCCGGCCG TGCTGCCGAC CGAGGTGCTG GAGCAGGCAA GGGAAGAGAT GCTCTCTTGG CAAGGCAGCG GCATGAGCGT GATGGAGATG AGCCATCGCG GCCGCGAGTT CGAAAGCATC ATGGCGCAGG CATTCGCCGA TTTGCGCGAA TTGCTGGCGG TGCCCGACAA CTACGAGATC CTGTTCCTGC AGGGCGGCGC CATCGCCGAG AATGCCATCG TCCCGCTCAA TCTGATGCGC CGGCTGTCGC TCGACGCGCC CAAGGCGGAT TACGTCGTGA CCGGCACGTG GTCGGTGAAG TCGCAGCAGG AAGCGCGCAA ATACGGTGAA GTGAATATCG CCGCATCGAG CGAGGCCGAG CGTTTCCACC GGATCCCGGA TGTGTCCGCC TGGAAGCTGT CGGATGACGC GGCTTACGTG CATCTGTGCA CCAACGAGAC CATCGTCGGC GTCGAATACC AGGAGACGCC GGACATTGGC CAGGCGCATG GGCGCGTGGT GGTGGCCGAT GTTTCGAGCC ACATTCTGTC GCGGCCGGTC GACTGGAACG GCTATGCGGT GCTTTACGGC GGCGCGCAGA AGAACATCGG GCCGGCGGGC CTGACCATCG TGATCGCGCG CAAGGATCTG CTGGGCCACG CGCACCCGCT GTGCCCGTCG GCCTTCAACT GGCGCCTGGT GGCCGAGAAC GGCTCGATGT ACAACACGCC GCCCACCTAC GCCATCTATG TCGCCGGACT GGTGTTCCAG TGGATCAAGC GCCAGGGCGG CGTGGAGGCG CTGGAGACCC GCAACATCGT CAAGGCGAAG ATGCTGTACG ACTTCATCGA CGCCAGCGGT TTCTATCGCA ACGACATTCA TCCGTCGTGC CGTTCGCGCA TGAATGTGCC GTTCTTCCTC AACGACGAAT CCCGCAACGA AGCCTTCCTC GCGCAGGCGC GCGCGCAAGG GCTGGTGCAG CTCAAGGGCC ACAAGTCCGT GGGCGGCATG CGGGCGAGCA TCTACAACGC GATGCCGCTG GAGGGCGTGG AGGCGCTGGT CGACTTCATG CGCGAATTCG AGCGGACCGC CGCCTGA
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Protein sequence | MNQADRALQA SQARVYNFSA GPAVLPTEVL EQAREEMLSW QGSGMSVMEM SHRGREFESI MAQAFADLRE LLAVPDNYEI LFLQGGAIAE NAIVPLNLMR RLSLDAPKAD YVVTGTWSVK SQQEARKYGE VNIAASSEAE RFHRIPDVSA WKLSDDAAYV HLCTNETIVG VEYQETPDIG QAHGRVVVAD VSSHILSRPV DWNGYAVLYG GAQKNIGPAG LTIVIARKDL LGHAHPLCPS AFNWRLVAEN GSMYNTPPTY AIYVAGLVFQ WIKRQGGVEA LETRNIVKAK MLYDFIDASG FYRNDIHPSC RSRMNVPFFL NDESRNEAFL AQARAQGLVQ LKGHKSVGGM RASIYNAMPL EGVEALVDFM REFERTAA
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