Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0809 |
Symbol | |
ID | 1219617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 856154 |
End bp | 856735 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 637237171 |
Product | hypothetical protein |
Protein accession | NP_518930 |
Protein GI | 17545528 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2816] NTP pyrophosphohydrolases containing a Zn-finger, probably nucleic-acid-binding |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.419231 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCTTCG ATTACCGTTT CTGCCCGCAA TGCGCGGCGC CGCTCGTCGA GCAGCATGCC GGCGGCCGGC TGCGCATCGC GTGCCCGGCG CCGGACTGCG GCTTCGTGCA CTGGAACAAT CCGCTGCCGG TGCTGGCGGC GGTGGTCGAG TATCGCGGAC AGATGTTCCT GGCGCGCAAC GCGCTGTGGC CGGAGGGCAT GTTCGCGCTG GTCACCGGCT TCCTGGAGCG CGATGAGACG CCCGAGCAGG GCATCGCGCG CGAGCTCAAG GAAGAGACCC GCCTCGATGC CCGCGCGATC TCACTGATCG GCGTCTACGA GTTCATCCGC AAGAACGAGC TGATCATCGC CTACCACGTG GTGGCCGACG GCGAGATCGC GCTGTCGGAA GAACTGGCCG AATACCGCCT GCTGCCGTTC GAGCAGGTCC GCCCGTGGAC GGCCGGCACC GGCTACGCGG TGGCGGACTT CCTCGCCGCG CGCGGCCTGC CGATCCGCTA CATCGACCTG CGCACCGGCG CGCCCGCCGA ACCGCCGCCA CGCCACTGGC AGCCCGACGG CACGGCTACA ATCACGGCAT GA
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Protein sequence | MGFDYRFCPQ CAAPLVEQHA GGRLRIACPA PDCGFVHWNN PLPVLAAVVE YRGQMFLARN ALWPEGMFAL VTGFLERDET PEQGIARELK EETRLDARAI SLIGVYEFIR KNELIIAYHV VADGEIALSE ELAEYRLLPF EQVRPWTAGT GYAVADFLAA RGLPIRYIDL RTGAPAEPPP RHWQPDGTAT ITA
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