| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0798 |
|---|
| Symbol | |
|---|
| ID | 1219606 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia solanacearum GMI1000 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_003295 |
|---|
| Strand | + |
|---|
| Start bp | 844216 |
|---|
| End bp | 845361 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 637237160 |
|---|
| Product | putative purine nucleoside permease protein |
|---|
| Protein accession | NP_518919 |
|---|
| Protein GI | 17545517 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG5042] Purine nucleoside permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTTCCCGC TGTTCCCCAA TCCCCAAACG AGGAGAACCA TGAGCGTCCT ATCCGAACAG
GTCGACGGCC GGCCGCCGCA GCCGCCGTCT GGGCGGCGCG GCAAACGATG GCTCCGGGCC
ATCGCCGCCG GCGCGCTGCT GGCGGCCGGC GGCGGCGCGT CCACGCAGCC GGTCGCGCAG
CAGGCGCCGC AGTCGCACGC GCGCAAGGTC AAGGTGCTGA TCATCAGCAT GTTCGCGCCC
GAGGCCCAGC CGTGGATCGA CAAGCTGGGC CTGACGCAGG CGGTGCCGGT GCCGGGCCTG
TCGATCGACT ACCCGAGCGT CCACTGCAAC GCCAGCGACG TCTGCCAGCT GACCACCGGC
ATGGGCAAGG CCAATGCGGC ATCGTCGGTG TCGGCACTGA TCCATAGCGG GCAGTTCGAT
CTGTCGCGCG CGTATTTCCT GGTGGCGGGC ATCGCCGGCA TCGATCCGTC GCAGGGCACG
CTCGGCACGG CGGCGTGGGC GCGCTACCTG GTCGACAGCG ATCTGGCCTG GGAGATCGAC
GCGCGCGAGG TTCCCGCCGA CTGGCCCAAC GGCTTCATCG GCATCAATAC GCAGGGGCCG
GGGCAGAAGC CGCCGCTGAA CTACAAGACG GAAATCTTCC GCGTGAACGA GGCGCTGCTG
CAGAAGGCGC TGGCGCTCTC GAAGGGCGCC GTGCTGGACG ACAACGCCAC CGCGCGCGCC
TACCGCGCCA ACTACCCGAG CGCGCCGGCC AACCAGCCGC CCGCCGTCGT GCAGTGCGAC
ACCGCGGCCG GCAATACGTA CTGGCACGGC GCGCTGCTCG GCCAGCGCGA AGCCGCCTGG
GTCAAGCTGC TGACCGACGG GCAGGGCACG TACTGCACCA CCCAGCAGGA AGACAACGCC
ACCTTCGAGG CGCTGACGCG CGGATCGAAG GCCGGCCTGC TCGATCTGCA GCGCGTGGCC
GTGCTGCGCA CCGCCTCCAA CTTCGACCGG CCGTATCCGG GGCAGACGCC GTACGACTCG
CTGGTGGGCA GCAACTCGGG CGGCTTTGTG CCGTCGCTCA ACAACCTCTA TCTGGCGGGC
GGCCCGCTGG TCAACGACAT CGTCACGCGC TGGAGCGTGT GGAAACACGG AGTGCCCTCG
CCATGA
|
|---|
| Protein sequence | MFPLFPNPQT RRTMSVLSEQ VDGRPPQPPS GRRGKRWLRA IAAGALLAAG GGASTQPVAQ
QAPQSHARKV KVLIISMFAP EAQPWIDKLG LTQAVPVPGL SIDYPSVHCN ASDVCQLTTG
MGKANAASSV SALIHSGQFD LSRAYFLVAG IAGIDPSQGT LGTAAWARYL VDSDLAWEID
AREVPADWPN GFIGINTQGP GQKPPLNYKT EIFRVNEALL QKALALSKGA VLDDNATARA
YRANYPSAPA NQPPAVVQCD TAAGNTYWHG ALLGQREAAW VKLLTDGQGT YCTTQQEDNA
TFEALTRGSK AGLLDLQRVA VLRTASNFDR PYPGQTPYDS LVGSNSGGFV PSLNNLYLAG
GPLVNDIVTR WSVWKHGVPS P
|
|---|
| |