Gene RSc0728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0728 
SymbolnrdR 
ID1219534 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand- 
Start bp775982 
End bp776431 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content63% 
IMG OID637237088 
Producttranscriptional regulator NrdR 
Protein accessionNP_518849 
Protein GI17545447 
COG category[K] Transcription 
COG ID[COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains 
TIGRFAM ID[TIGR00244] transcriptional regulator NrdR 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.443303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATGCC CGTTCTGCGG CCACGCGGCC ACCCAGGTGA TTGACACCCG CATGTCGGAG 
GAAGGCGACA CCGTGCGCCG CCGCCGCCGC TGCGAATCCT GCGACCGCCG CTTCACGACC 
TATGAGCGCA TCGAGCTGTT CTTCCCAGCC GTCGTCAAGA AGAACGGCAG CCGCGTCGAC 
TACGACCGCA ACAAGGTCAA GGATTCGATG CGCCTGGCGC TGCGCAAGCG CCCCGTCTCG 
GCCGAGGCCA TCGACGAGGC CATCGCCCGC ATCGAAGAAA AGCTGCTCTC CCACGGCGAG 
AAGGAGATCG GCAGCGACCG CATCGGCGAG CTGGTGATGC GCGAACTCAA ACGCCTGGAC 
AAGATCGGAT ACATCCGCTT TGCCTCCGTT TACCGGAGTT TTGAGGATGT GTCGGAATTT 
CGCGACATGC TGGACGAGTT CCGGCAGTAA
 
Protein sequence
MKCPFCGHAA TQVIDTRMSE EGDTVRRRRR CESCDRRFTT YERIELFFPA VVKKNGSRVD 
YDRNKVKDSM RLALRKRPVS AEAIDEAIAR IEEKLLSHGE KEIGSDRIGE LVMRELKRLD 
KIGYIRFASV YRSFEDVSEF RDMLDEFRQ