Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0706 |
Symbol | |
ID | 1219512 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 753094 |
End bp | 753750 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637237066 |
Product | hypothetical protein |
Protein accession | NP_518827 |
Protein GI | 17545425 |
COG category | [S] Function unknown |
COG ID | [COG4318] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0154953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCTATGCT GCCCGGACCC GCGCCGGCGC GGGCAGCACA ACAACCGGCG GAGGAACGCC ATGCCCAAGC TCCACGAATC CCGCATCCAC GATCTGCGCC CGACCCAGCT GACTGTGGGC ATGATCGAGG TGCAGGCCAA GAAGACGCAT CTGGCCGCCA TGGCACCGGC CGACCAGCAG GCCTTCATGC AGGCGCATCC GATCCCGGCG GTGCTCGGCC CGGGCGGACA GCTGTACATC ACGGACCACC ACCATCTCGG GCGCGCGGCG CTGGATGCCG GCGTGATCAC CGGCTACTTC ATGGTCGAAG CCGACCTGTC GCAGCACAGC CTGGACGACT TCTGGAAAGC GATGGACCAG AACCTGTGGG TCCATCCGCT CGACGAGCAC GGCGTGCGGC ACTACTACGC CAGCATCCCC AAGCACCTGG AAAAGCTGGT CGACGATCCT TACCGGTCGC TGGCCGGCTA TGTGCGCGAC GCCGGCGGCT ACGACAAGAC GCCGACCGCC TTTGCGGAGT TCGTGTGGGC CGATTTCTTC CGCCGCTCGA TCCCCATCGA GGACCTGCTG GCCGATTTCC AGGCAGCCGT CCACGCCGCG CTGCCGCTGG CAAAAAGCAA ATTCGCCAAA GCCCTGCCGG GGTACAACGG CAAGTAA
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Protein sequence | MLCCPDPRRR GQHNNRRRNA MPKLHESRIH DLRPTQLTVG MIEVQAKKTH LAAMAPADQQ AFMQAHPIPA VLGPGGQLYI TDHHHLGRAA LDAGVITGYF MVEADLSQHS LDDFWKAMDQ NLWVHPLDEH GVRHYYASIP KHLEKLVDDP YRSLAGYVRD AGGYDKTPTA FAEFVWADFF RRSIPIEDLL ADFQAAVHAA LPLAKSKFAK ALPGYNGK
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