Gene RSc0706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSc0706 
Symbol 
ID1219512 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia solanacearum GMI1000 
KingdomBacteria 
Replicon accessionNC_003295 
Strand
Start bp753094 
End bp753750 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID637237066 
Producthypothetical protein 
Protein accessionNP_518827 
Protein GI17545425 
COG category[S] Function unknown 
COG ID[COG4318] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0154953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCTATGCT GCCCGGACCC GCGCCGGCGC GGGCAGCACA ACAACCGGCG GAGGAACGCC 
ATGCCCAAGC TCCACGAATC CCGCATCCAC GATCTGCGCC CGACCCAGCT GACTGTGGGC
ATGATCGAGG TGCAGGCCAA GAAGACGCAT CTGGCCGCCA TGGCACCGGC CGACCAGCAG
GCCTTCATGC AGGCGCATCC GATCCCGGCG GTGCTCGGCC CGGGCGGACA GCTGTACATC
ACGGACCACC ACCATCTCGG GCGCGCGGCG CTGGATGCCG GCGTGATCAC CGGCTACTTC
ATGGTCGAAG CCGACCTGTC GCAGCACAGC CTGGACGACT TCTGGAAAGC GATGGACCAG
AACCTGTGGG TCCATCCGCT CGACGAGCAC GGCGTGCGGC ACTACTACGC CAGCATCCCC
AAGCACCTGG AAAAGCTGGT CGACGATCCT TACCGGTCGC TGGCCGGCTA TGTGCGCGAC
GCCGGCGGCT ACGACAAGAC GCCGACCGCC TTTGCGGAGT TCGTGTGGGC CGATTTCTTC
CGCCGCTCGA TCCCCATCGA GGACCTGCTG GCCGATTTCC AGGCAGCCGT CCACGCCGCG
CTGCCGCTGG CAAAAAGCAA ATTCGCCAAA GCCCTGCCGG GGTACAACGG CAAGTAA
 
Protein sequence
MLCCPDPRRR GQHNNRRRNA MPKLHESRIH DLRPTQLTVG MIEVQAKKTH LAAMAPADQQ 
AFMQAHPIPA VLGPGGQLYI TDHHHLGRAA LDAGVITGYF MVEADLSQHS LDDFWKAMDQ
NLWVHPLDEH GVRHYYASIP KHLEKLVDDP YRSLAGYVRD AGGYDKTPTA FAEFVWADFF
RRSIPIEDLL ADFQAAVHAA LPLAKSKFAK ALPGYNGK