Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0691 |
Symbol | |
ID | 1219496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 739188 |
End bp | 740573 |
Gene Length | 1386 bp |
Protein Length | 461 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637237050 |
Product | putative phosphomannomutase or phosphoglucomutase protein |
Protein accession | NP_518812 |
Protein GI | 17545410 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1109] Phosphomannomutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0002556 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATTG ACCCCTCCAT CTTCAAGGCC TATGACATTC GCGGCATCGT CGGCAAGAAC GTCGACCGTG AAACCGCGCG GCTGATCGGC CGGGCCTTCG GTTCGGCGGC CCGCGCCAAG GGCGAGGCCG CGGTGGTGAT CGGCCGCGAC GGCCGCCTGT CCGGTCCGGA TCTCGTGGGC GGCCTGGCCG AAGGCCTGCG CCAGAGCGGC GTGGACGTGA TCGACCTCGG GCTGGTGGCC ACGCCGATGG TCTACTTCGG CACCAACATC GAGCTGGCCG GCCGTCGCGC CACGTCCGGC GTGATGGTCA CCGGCAGCCA CAACCCGCCC GACTACAACG GCTTCAAGAT GGTGCTGGCA GGCCAGGCCA TCTACGGCGA GCAGATCCAG GCGCTGCGCC AGCGCATCGA GCAGGGTGAC TTCACCGAGG GCGCCGGTGC ATATGTCCAG GTGGACCTGC GGCAGCAGTA CATCGACCGC ATCGTCTCCG ACGTCAAGAT GGCGCGGCCG ATGAAGATCG CGGTGGACTG CGGCAACGGC GTGGCGGGCG CCTTCGCGCC GGCGCTGTTC CGCGCCATGG GCTGCGAGGT GACGGAGCTG TTCTGCGAAG TGGACGGCCA TTTCCCGAAC CACCACCCGG ATCCGGCCCA CGTCGAGAAC CTGCAGGATC TCGTGCGCAC GCTGCAGACG ACCGACTGCG AGCTCGGCCT CGCCTTCGAC GGCGACGGCG ATCGCCTGGG CGTGGTCACC AAGGATGGCC AGGTGATCTT CCCGGACCGC CAGCTGATGC TGTTCGCGCA GGAGGTGCTG TCGCGCAACC CGGGCGGCGA GATCATCTTC GACGTAAAGT GCACCGGCAA GCTGGCGCCG TTCATCCGCG AACATGGCGG CAAGGCCACG ATGTGGAAGA CGGGACACTC GCTGGTCAAG GCCAAGCTGA AGGAAACCGG CGCGCCGCTG GCCGGCGAGA TGAGCGGCCA TATCTTCTTC AAGGACCGCT GGTACGGCTT CGACGACGGT CTCTATACCG GCGCGCGCCT GCTGGAGATC GTGTCGCGCC ACGCCGATCC GAGCGCCGTG CTGAACGCGC TGCCGAATTC GCACTGCACG CCCGAGCTGC AGCTCAAGTG CGCCGAGGGC GAGCCGTTCG CGCTGCTCGA CAGGATCAAG GCGAACGCGA CCTTCGATGG CGCGAAGGAA GTGAACCGCA TCGACGGCGT GCGCGTGGAG TATGCCGATG GCTTCGGCCT GGCGCGTCCG TCCAACACCA CGCCGGTGGT GGTGATGCGC TTCGAGGCTG ACAACGATGC CGCCATGGCG CGCATCCAGG GCGAATTCCG CCGCGTGATC CTGGCCGAGA AGCCGGACGC GAAGCTGCCG TTCTGA
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Protein sequence | MQIDPSIFKA YDIRGIVGKN VDRETARLIG RAFGSAARAK GEAAVVIGRD GRLSGPDLVG GLAEGLRQSG VDVIDLGLVA TPMVYFGTNI ELAGRRATSG VMVTGSHNPP DYNGFKMVLA GQAIYGEQIQ ALRQRIEQGD FTEGAGAYVQ VDLRQQYIDR IVSDVKMARP MKIAVDCGNG VAGAFAPALF RAMGCEVTEL FCEVDGHFPN HHPDPAHVEN LQDLVRTLQT TDCELGLAFD GDGDRLGVVT KDGQVIFPDR QLMLFAQEVL SRNPGGEIIF DVKCTGKLAP FIREHGGKAT MWKTGHSLVK AKLKETGAPL AGEMSGHIFF KDRWYGFDDG LYTGARLLEI VSRHADPSAV LNALPNSHCT PELQLKCAEG EPFALLDRIK ANATFDGAKE VNRIDGVRVE YADGFGLARP SNTTPVVVMR FEADNDAAMA RIQGEFRRVI LAEKPDAKLP F
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