Gene RSc0554 details

Gene Information

• Locus tag: RSc0554
• Symbol: sucC
• ID: 1219359
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Ralstonia solanacearum GMI1000
• Kingdom: Bacteria
• Replicon accession: NC_003295
• Strand: +
• Start bp: 598777
• End bp: 599943
• Gene Length: 1167 bp
• Protein Length: 388 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637236913
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: NP_518675
• Protein GI: 17545273
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAATATCC ATGAGTACCA AGGCAAGGAA ATCCTGCGCA AATACAATGT GCCGGTTCCG 
CGCGGCATTC CGGCTTTTTC GGTCGAAGAG GCCCTGAAGG CCGCTGAAAC CCTGGGCGGC 
CCGGTGTGGG TCGTGAAGGC GCAGATTCAT GCGGGCGGCC GCGGCAAGGG CGGCGGCGTG 
AAGGTTGCCA AGAGCATGGA CGAGGTGAAG ACCTACGCCA GCAACATCCT GGGCATGACC 
CTGGTGACGC ACCAGACCGG CCCGGAAGGC AAGAAGGTCA ACCGCCTGCT GATCGAAGAA 
GGCGCGGACA TCAAGAAGGA ACTGTACGTG TCGCTGGTGG TGGACCGCGT CTCGCAGAAG 
GTCGCCCTGA TGGCCTCCAG CGAAGGCGGC ATGGACATCG AAGAAGTCGC TGCCCACACC 
CCGGAAAAGA TCCACACGCT GATCGTCGAT CCGCAAATCG GCCTGCAAGA CGCTGAAGCC 
GACGACATCG CCCGCAAGAT CGGCGTGCCC GACGCGAGCG TGCCGCAAGC CCGCCAAGCC 
CTGCAAGGCC TGTACAAGGC ATTCTGGGAA ACCGACGCTT CGCTGGCGGA AATCAACCCG 
CTGATCCTGA CCGGCGACGG TAAGGTCATC GCGCTGGACG CCAAGTTCAA CTTCGACTCC 
AACGCGCTGT TCCGTCACCC GGAAATCGTC GCCTACCGCG ACCTGGATGA AGAAGACGCC 
AACGAAATCG AAGCCTCGAA GTTCGATCTG GCCTACATCT CGCTCGACGG CAACATCGGC 
TGCCTGGTGA ACGGCGCCGG CCTGGCCATG GCCACCATGG ACACCATCAA GCTGTTCGGC 
GGCGAGCCGG CCAACTTCCT CGACGTGGGC GGCGGCGCCA CCACCGAGAA GGTCACCGAA 
GCCTTCAAGC TGATGCTGAA GAACCCGGGC CTGAAGGCCA TCCTGGTGAA CATCTTCGGC 
GGCATCATGC GCTGCGACGT GATCGCCGAA GGCGTGATCG CCGCGTCGAA GGCCGTGTCG 
CTGTCGGTGC CGCTGGTGGT CCGCATGAAG GGCACCAACG AAGACCTCGG CAAGAAGATG 
CTGGCCGACT CGGGTCTGCC CATCATCGCC GCCGACACGA TGGAAGAGGC CGCCCAGAAG 
GTCGTGGCCG CAGCCGCCGG CAAGTAA 

 

Protein sequence

MNIHEYQGKE ILRKYNVPVP RGIPAFSVEE ALKAAETLGG PVWVVKAQIH AGGRGKGGGV 
KVAKSMDEVK TYASNILGMT LVTHQTGPEG KKVNRLLIEE GADIKKELYV SLVVDRVSQK 
VALMASSEGG MDIEEVAAHT PEKIHTLIVD PQIGLQDAEA DDIARKIGVP DASVPQARQA 
LQGLYKAFWE TDASLAEINP LILTGDGKVI ALDAKFNFDS NALFRHPEIV AYRDLDEEDA 
NEIEASKFDL AYISLDGNIG CLVNGAGLAM ATMDTIKLFG GEPANFLDVG GGATTEKVTE 
AFKLMLKNPG LKAILVNIFG GIMRCDVIAE GVIAASKAVS LSVPLVVRMK GTNEDLGKKM 
LADSGLPIIA ADTMEEAAQK VVAAAAGK