Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0427 |
Symbol | |
ID | 1219231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | - |
Start bp | 453907 |
End bp | 455124 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 637236785 |
Product | 3-oxoacyl-(acyl carrier protein) synthase I |
Protein accession | NP_518548 |
Protein GI | 17545146 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.779861 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.65749 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAACCTC TCCTGCTCAC GCACTTCACC GCCACGAGCT GCCTCGGACG CGGCCTCGAC GCCACGCTCG ATGCCCTGCG CGGGCAGCGC GGCGGCCTCG CGCCCTGCCG CTTCGAGCGC GCTGACCTCG ACACCTGGAC CGGCGCGGTC GAGGACGTCG ACGCCCAGCC CGTGCGCGCC GACCTGAGCG ACTTCGAGTG CCGCAACAAC CGGCTCGCGC AGATCGGCCT GACGCAGGAC GGCTTCGCCG AACAGGTCGA GGCAGCACGG GCGCGCCATG GCGCCGGGCG CATCGGCGTC TTCGTGGGCA CCAGCACCGC CGGCATCCTG GAGACCGAAC TCGCCTACCG GCACCGCGAT CCGCAGACCG GCGCCCTGCC CGCCGATTTC CGCTACGCGC ACACGCACAG CCCCTATTCG TCCGCCGCCT TCGTGCGCGC CTATTTCGGG CTGCACGGCC CGGCCATGTC GGTCTCGTCG GCCTGCTCGT CCGGCGCCAA GGTCTTCGGC TCGGCGCGGC GCATGCTCGA AGCCGGCCTG ATCGACGCGG CGGTCGTGGG CGGCGTGGAT TCGCTGTGCC TGACCACGCT GTACGGCTTC AACTCGCTCG AACTGCTGTC GCGGCAACCA TGCAAGCCGT TCGACGTGGC GCGTGACGGC ATCTCGATCG GCGAGGCTGC AGCCTTCGTC CTGCTCGAGC GCGCCGACGG CCGGTCCGGG CACGACGAGG CCATCCTGCT GCTCGGCGTC GGCGAATCGA GCGACGCGCA CCACATGTCG ACGCCGCATC CGGAGGGACT GGGCGCGCGC CTGGCGATGG AGCAGGCGCT GGCCTCGGCC GGCATCGCGG CCGAGGCGAT CGACTACATC AACCTGCACG GCACGGCCAC CGCCAGCAAC GACGCCGCCG AAAGCCACGC GGTCAACGCA CTGTTCAGCG GCACGCCGTG CAGTTCGACC AAGGGCGCGA CCGGCCACAC GCTGGGCGCG GCGGGGGCGC TGGAAGCGGT GATCGCGGCG CTCGCGCTGC GCCATCAACT GCTGCCCGCC GGCATCAACA CGACCCGGCC CGATCCGGTG CTCGCGCTCG ACTACGTGCT GACGAGCCGA CCGGCCCGCC TGCGCGCCGC CCTCAGCAAT GCGTTCGGCT TCGGCGGCAC CAACTGCAGC CTGGTGCTCG GCCGCACGGA CAGCCTCGCC ACCTCCATCG CCCCATGA
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Protein sequence | MKPLLLTHFT ATSCLGRGLD ATLDALRGQR GGLAPCRFER ADLDTWTGAV EDVDAQPVRA DLSDFECRNN RLAQIGLTQD GFAEQVEAAR ARHGAGRIGV FVGTSTAGIL ETELAYRHRD PQTGALPADF RYAHTHSPYS SAAFVRAYFG LHGPAMSVSS ACSSGAKVFG SARRMLEAGL IDAAVVGGVD SLCLTTLYGF NSLELLSRQP CKPFDVARDG ISIGEAAAFV LLERADGRSG HDEAILLLGV GESSDAHHMS TPHPEGLGAR LAMEQALASA GIAAEAIDYI NLHGTATASN DAAESHAVNA LFSGTPCSST KGATGHTLGA AGALEAVIAA LALRHQLLPA GINTTRPDPV LALDYVLTSR PARLRAALSN AFGFGGTNCS LVLGRTDSLA TSIAP
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