| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0406 |
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| Symbol | ptsN |
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| ID | 1219210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | - |
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| Start bp | 434350 |
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| End bp | 434805 |
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| Gene Length | 456 bp |
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| Protein Length | 151 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637236764 |
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| Product | putative nitrogen regulatory IIA (enzyme IIA-Ntr) (phosphotransferase enzyme II, A component) transcription regulator protein |
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| Protein accession | NP_518527 |
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| Protein GI | 17545125 |
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| COG category | [G] Carbohydrate transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG1762] Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type) |
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| TIGRFAM ID | [TIGR01419] PTS IIA-like nitrogen-regulatory protein PtsN |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.275457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATCGCT TGGCCAAACT GCTGCCGCCC GGGAATATTG CCCTCGACGT CAGCGTAACC
AGCAAAAAGC GGGTGTTTGA ACAGGCAGGC CTGCTGTTCG AGAACAATCA CGGGGTTGCC
CGCGCGACCG TCACCGACAA CCTGTTTGCA CGGGAATCCC TCGGATCGAC GGGCCTGGGA
GCTGGCGTGG CCATTCCGCA CGGCCGCATC AAGGGCCTCA AGCAGCCGCT GGCGGCATTC
ATGCGCCTGT CCGAGCCCGT GCCCTTCGAA TCGCCCGACG GCAAGCCCGT CTCGCTGCTG
ATCTTCCTGC TGGTGCCGGA ACAGGCCACC CAGCAGCATC TGGAGATCCT GTCCGAAATC
GCCCAGCTGC TGTCCGACCG CGACATGCGC GAGGGACTCA CCACCCTGCC GTCGCCCGAG
GCGATTCACC AGCTACTCAC CGACTGGCGC CCTTAG
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| Protein sequence | MNRLAKLLPP GNIALDVSVT SKKRVFEQAG LLFENNHGVA RATVTDNLFA RESLGSTGLG
AGVAIPHGRI KGLKQPLAAF MRLSEPVPFE SPDGKPVSLL IFLLVPEQAT QQHLEILSEI
AQLLSDRDMR EGLTTLPSPE AIHQLLTDWR P
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