| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0131 |
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| Symbol | |
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| ID | 1218934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 152819 |
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| End bp | 154792 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 637236488 |
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| Product | lipoprotein |
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| Protein accession | NP_518252 |
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| Protein GI | 17544850 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0671] Membrane-associated phospholipid phosphatase |
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| TIGRFAM ID | [TIGR02601] autotransporter-associated beta strand repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCATCA ACACCACGCG TTTCCAATCC GGCCTCGTCG CGGTCTGCGG CGCTCTGGCC
CTGACCGCCT GCGGCGGCGG CGACGACACC GCCGCCGGCG ACAACTCCGT CGCCACCGTC
CAGGCCATTC CCGCGCCGCC GGCCGATCCG GGCTTCGTCG ATTCGGCACC CGTGGCGACC
TCGGTGCCGG CCTTCGTCGA CAACATCGCC ACCAACCAGC GCGGCGATGC GCGCTATGCG
ACGCTGGGCA CCAACGCGGG CGTGCGGCTG TTCACGCGCT TCCTGGACCT GTGGCAGCCG
CTGACGGAGA TCGTCGACGC CGGCGTGTCG GCGCCCGCCA ACGGGTCGTT CCCCGCCGTG
GTCGCGTCCA CCTGGACGGG CCTGCCCAAC GACGGCACGG CCGGCGGCAC CCAGCTCAAT
CTGCCGGTGC TCAACGCAAA CGTTCAATAT GTCGTCAGCG CCACCACCGG CCGCACGCAG
GCCCAGGCCG ACGCCGCCTA CTTCGACGAC CGGCGCGGCA AGGGCTACAG CGTGACCGAC
GGCATGGGGC CGCTGACCAC CACCTGGCGC ACGCTGACCC AGCAGACCAC CTCTATCACC
ACCGTGCCGG CCGATGCCAC CACCGTGCTG TACAACGACT CCGGCAACAA CACCGGCGTC
AGCACCGCGA GCGGCAACAC CACCTTCGGC AAGGTGGTGG ACCTGATCAA CACCATGGGC
AACAACGCCT CCACCGAGCC GGCCAAGCGC TTCTACAAGT ACGCGCGGCC GTACCGCTGG
AGCAGCAGCG TGGTCGTCGT GCCGACGCTG GTGCCGGCCG AAAGCTCGAA CCCGGCCACC
GACGGCGGCT TCATCAGCGG CCACTCCGCC GAAGCCGTGC GCGATGCCAT GGCGATGGCC
TATCTGGTGC CGGAGCGCTT CCAGCAGATG CTGGCCCGCG GCCTGGAGCT GGGCGAGAAC
CGCATCTTCG CGGGCATGCA TTCGCCGCTG GACGTGATCG GCGGGCGCAT GCTCGGCCTG
GCCGCGGTGG CCGCCAACCT CTATGACCCG GCCAACGCCA CGCTCAAGGC CACCGCCTAC
ACCCAGGCGC ACACCGCCCT GATGGCGCAG ACCGGCACCG ATGCCACCAC GTTCGCCGCC
TTCGCGCAGT CCGGCACCCT CACCACCGAC CGCTTCGCCG ACTACGCCAC CAACCAGGCC
AACTTCACGC GGCGCATGAC CTTCGGCTTC TCGCAGATCA ACAGCACGGC GCTGGCGCCG
GTGGTGCCCA AGGGCGCCGA GGTGCTGCTG GAAACGCGCT TCCCGTACCT GAGCGCCGAC
CAGCGCCGCG TGGTGCTGAA GACCACCGAG CTGGCCTCCG GCTACCCGGT GATGGACGAC
GCCGAAGGCT GGGGCCGCCT GAACCTGTTC GCGGCCGCCG ACGGCTATGG CGCGTTCAAC
GGCAGCGTGG TCGTGTCGAT GGATGCCTCG CAGGGCGGCT TCAATGCCGC CGACACCTGG
CGCAACGCGG TTGCCGGCGC GGGCAAGCTG ACGCTGCAGG GCACCGGCAC GCTGCGCCTG
GCCGGCAGCA ACACCTACAC GGGCGGCACG CAGGTCGCGG GCGGCGTGCT GGGGGCCGAC
TCGGCCACCG CGTTCGGCAC GGGCGACGTG TACCTGGGCG GCGGCACGCT GGTCGTCAAC
GCACCGTCGG CGCTGAATGT CGCCGGCAAG TTCACGCAGC TGCAGGGCAC CACGCTGGAG
CTCGACATCG GCGCGAACGG CCAGGGCAAA CTGAGCGTGG CGGGCCTGAC GACGATCGCG
GGCGGCACGC TGCACGTCAA GTTCGCGAGC GGCTACTCGC CCAAGGTGGG CGACACGATC
ACCGTGATCG ACGGCGCCGG CAGCAACCGC CAGTTCACCT CGGTCGTGGT CGACGGCTTC
AAGGCCACCG CGCTCTACAC GTCGACCGGC ATCCAGATCC GCCTGGACGC CTGA
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| Protein sequence | MSINTTRFQS GLVAVCGALA LTACGGGDDT AAGDNSVATV QAIPAPPADP GFVDSAPVAT
SVPAFVDNIA TNQRGDARYA TLGTNAGVRL FTRFLDLWQP LTEIVDAGVS APANGSFPAV
VASTWTGLPN DGTAGGTQLN LPVLNANVQY VVSATTGRTQ AQADAAYFDD RRGKGYSVTD
GMGPLTTTWR TLTQQTTSIT TVPADATTVL YNDSGNNTGV STASGNTTFG KVVDLINTMG
NNASTEPAKR FYKYARPYRW SSSVVVVPTL VPAESSNPAT DGGFISGHSA EAVRDAMAMA
YLVPERFQQM LARGLELGEN RIFAGMHSPL DVIGGRMLGL AAVAANLYDP ANATLKATAY
TQAHTALMAQ TGTDATTFAA FAQSGTLTTD RFADYATNQA NFTRRMTFGF SQINSTALAP
VVPKGAEVLL ETRFPYLSAD QRRVVLKTTE LASGYPVMDD AEGWGRLNLF AAADGYGAFN
GSVVVSMDAS QGGFNAADTW RNAVAGAGKL TLQGTGTLRL AGSNTYTGGT QVAGGVLGAD
SATAFGTGDV YLGGGTLVVN APSALNVAGK FTQLQGTTLE LDIGANGQGK LSVAGLTTIA
GGTLHVKFAS GYSPKVGDTI TVIDGAGSNR QFTSVVVDGF KATALYTSTG IQIRLDA
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