Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | RSc0125 |
Symbol | |
ID | 1218928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia solanacearum GMI1000 |
Kingdom | Bacteria |
Replicon accession | NC_003295 |
Strand | + |
Start bp | 147567 |
End bp | 147887 |
Gene Length | 321 bp |
Protein Length | 106 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637236482 |
Product | hypothetical protein |
Protein accession | NP_518246 |
Protein GI | 17544844 |
COG category | [K] Transcription |
COG ID | [COG2944] Predicted transcriptional regulator |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGAGA CCCGCTTCAA GAGCGATGCC TCGGAGGCCG TTCATAGCGC CGCTTCCGGC CTGCACCGCG CAGGCCTGAT CGGCAAGAAG ACCATGCGCG AATACGACGC GCTCTGCATC GAGGCCGTGC CGGCCTTCGA TGCGCAGGCC ATTGCCCGTA TCCGCCAGTC GGTCAACGTC AGTCAGAGCG TGTTTGCGGC CTATCTCAAT ACGACCACGT CAACGGTCCG GCAGTGGGAG CAGGGTGACA AGAAGCCGAG CGGCATGGCT GCACGCCTGC TCCAGCTTGT GCAAAAGCAC GGATTGGCCT TGTTTTCGTG A
|
Protein sequence | MTETRFKSDA SEAVHSAASG LHRAGLIGKK TMREYDALCI EAVPAFDAQA IARIRQSVNV SQSVFAAYLN TTTSTVRQWE QGDKKPSGMA ARLLQLVQKH GLALFS
|
| |