| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSc0034 |
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| Symbol | |
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| ID | 1218836 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia solanacearum GMI1000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_003295 |
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| Strand | + |
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| Start bp | 39866 |
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| End bp | 40459 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637236390 |
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| Product | RNA polymerase sigma factor |
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| Protein accession | NP_518155 |
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| Protein GI | 17544753 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02943] RNA polymerase sigma-70 factor, TIGR02943 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.797187 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCG CACCCGAGCA GCTCGACGCC CTGCGCCCGC ACCTGCTGCG CTTTGCGCAG
TTGCAGCTGC GTGATCCGGC ACTGGCCGAG GACGTGGTCG CCGATACCGT CCTCGCCGTG
CTGGAGCACC CCGAGCGCTT CGCCGGCAAC GCCTCGCTCA AGACCTACGT GATCGGCATC
CTCAAGCACA AGATCATCGA CGCGATCCGC TCGGGGCGGC GCGAAGTACG CGTCTCGCTG
CTTGCGGGCG GCGCATCCGA CGAGACCGAC CAGCGCACCG ACGAGGCCGT CTTCGATGCC
CTGTTCGCCG CCGACGGCCA CTACCTGACG CCGCCGTCCG ACTGGGGCAA CCCCGATGCA
GCGCTGTCGC GGCGCGAGTT CTTCGACATC CTGCAGATGT GCGTCGACCG CCTGCCGCCG
CGCGTCGGCC GCGTCTTCAT GATGCGCGAG TGGCTGGAGC TGGAGACGGA CGAGATCTGT
CAGGAATTGG AGATCACGGC GACCAATGCC TGGGCACTGC TGTACCGTGC CCGCATGCGC
CTGCGCGCGT GCCTGGACCT GCACTGGTTC GGCAACCAGG GCGCGGCCGC ATAA
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| Protein sequence | MTIAPEQLDA LRPHLLRFAQ LQLRDPALAE DVVADTVLAV LEHPERFAGN ASLKTYVIGI
LKHKIIDAIR SGRREVRVSL LAGGASDETD QRTDEAVFDA LFAADGHYLT PPSDWGNPDA
ALSRREFFDI LQMCVDRLPP RVGRVFMMRE WLELETDEIC QELEITATNA WALLYRARMR
LRACLDLHWF GNQGAAA
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