Gene RSP_3926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3926 
Symbol 
ID4796473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_009007 
Strand
Start bp100650 
End bp101654 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content67% 
IMG OID640103028 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_001033877 
Protein GI125654683 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGCGCA TCCTCGTCAC CGGCACGGCC GGCTTCATCG GCTTCCATCT CGCGCGCCTC 
CTGCTGGCCG AGGGCTTCCG CGTCCATGGC TACGACGGGA TGACCGACTA TTACGACGTG
GCCCTCAAGC GGCGGCGCCA TGCGATGCTG CTGCAGGACC CGAACTTCTC GGCCACGGAG
GGCATGCTCG AGGATCAGGC GCTCTTCGAC CGCGTGGCCG ATGAGTTCGC GCCCGAGGTG
ATCGTCCATC TCGCGGCCCA GGCGGGCGTG CGCTATTCGG TCGAGAACCC GCGCGCCTAT
CTCGATGCGA ATGTGATCGG CAGCTTCACC GTGATGGAGG CCGCGCGGCG GCTGAAGGTG
GCCCACCTGA TGATGGCCTC CACCTCCTCG GTCTATGGCG CCAACGAGGA GATGCCCTTC
CGCGAGACCG ACAAGGCCGA CCGCCAGCTC ACGATCTATG CCGCGACCAA GAAGGCCAAC
GAGAGCATGG GCCACGCCTG GGCGCATGTG CATGGCCTGC CCATCACGAT GTTCCGCTTC
TTCACCGTCT ACGGCCCCTG GGGGCGGCCC GATCTTGCGC TGTTCCGGTT CGTCGAGGCG
ATCCTCGAGG ACCGGCCGAT CGAGATCTAC AACCACGGCG AGATGTGGCG CGACTTCACC
TATGTGGACG ATCTCGTCCG CGCGATCCGG CTCCTGATCG AGGCCGTGCC CGGCGGCCCC
GAAACGGCGG TCGAGGAGGA CAGCCTCTCG CCCGCAGCCC CCTTCCGCAT CGTCAACATC
GGCAATTCCG ACAAGGTGCG GCTGCTGGAT TTCGTGGAGG CGATCGAGGA GAGCCTCGGG
CGGCGCGCGA TCCGCAGCTA CCTGCCGATG CAGGTGGGCG ACGTGCCCGC GACCTGGGCC
GACGCGGGGC TTCTCCAGCG CCTGACCGGC TACCGCCCGC AGACGGACAT CCGCGACGGG
ATCGCGCAGT TCGTCTCGTG GTATCGCGAT TACACGGGGA AGTAG
 
Protein sequence
MRRILVTGTA GFIGFHLARL LLAEGFRVHG YDGMTDYYDV ALKRRRHAML LQDPNFSATE 
GMLEDQALFD RVADEFAPEV IVHLAAQAGV RYSVENPRAY LDANVIGSFT VMEAARRLKV
AHLMMASTSS VYGANEEMPF RETDKADRQL TIYAATKKAN ESMGHAWAHV HGLPITMFRF
FTVYGPWGRP DLALFRFVEA ILEDRPIEIY NHGEMWRDFT YVDDLVRAIR LLIEAVPGGP
ETAVEEDSLS PAAPFRIVNI GNSDKVRLLD FVEAIEESLG RRAIRSYLPM QVGDVPATWA
DAGLLQRLTG YRPQTDIRDG IAQFVSWYRD YTGK