Gene RSP_3922 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRSP_3922 
Symbol 
ID4796444 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodobacter sphaeroides 2.4.1 
KingdomBacteria 
Replicon accessionNC_009007 
Strand
Start bp105068 
End bp106009 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content71% 
IMG OID640103032 
Producthemolysin-type calcium-binding protein 
Protein accessionYP_001033881 
Protein GI125654687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAAG TCTCTCCTTT CCCCAGCCTC TCCCCGCTGT CCGCTCCCCT GGCCCAGAGC 
GCGCTCGCCC AGACCCCGGC CGGCACCCCC GGCAACGACC TGCTGAACGG CGGGCCCGGG
GCCGACCGGC TGGTCGGCGG GGACGGCAAC GACACGATCA ACGGCCGCGA CGGCGTGGAC
CGGCTCTATG GCGGCGATGG CGACGACCTT CTGGACGGCG GCTTCTACCA TGACGCCTGC
TACGGCCAGG CCGGCAACGA CACGTTCCGC ATCCGCGGCG TGGATCTCGC CGACGATGTC
TATGGCGGGG CGGGGACCGA CACGCTGGAC CTGAGCGGCT ACACCAACCT GCGGCTCGGC
TTCCGGGTGG ATCTGGCCGC GGGGCGCTAC GACTTCCGGC CCGAGCCCTT CGGCCCCTAT
GTGGTGAAAT CGATCGAGAT CGTCATAGGC TCGGCGCGGG CCGATGTGCT TCTGGGCAGC
CGTCTGGCCG AGACGCTGTC GGGCGGGCTC GGCAACGACC GGCTCGAGGG GCGGGGCGGG
GCGGATGTGC TGCGCGGCAT GGAGGGGGCC GATGCGCTCT TCGGCGGCAC CGGCAACGAC
CTGCTGCTCG GCGGCGCGGG CAACGACCGG CTCGACGGCC AGTGGGAGCG CGACGTGCTG
GTGGGCGGGG CGGGCAACGA CATCCTGATC GGCGGCGGCG GGGCGGACCG GTTCGTCTTC
GCCGGCAATT TCGGCCGGGA CCGGATCCGC GACTTCTCGC CCGACATGGA AGGCGAGTGG
ATCGACCTGC GCGGGGTGGG GGCCATCACC GGCTTCGGCG ATCTGATGGC GAACCATCTG
TCGGAGGTGA ACGGCCATGT CGTGATCGAG GTGGGCGCGA ACCGGATCAC GCTCGAGGGG
ATCTCCTCCG AGATGCTCAC CCGCGACGAC TTCCTGTTCT GA
 
Protein sequence
MPEVSPFPSL SPLSAPLAQS ALAQTPAGTP GNDLLNGGPG ADRLVGGDGN DTINGRDGVD 
RLYGGDGDDL LDGGFYHDAC YGQAGNDTFR IRGVDLADDV YGGAGTDTLD LSGYTNLRLG
FRVDLAAGRY DFRPEPFGPY VVKSIEIVIG SARADVLLGS RLAETLSGGL GNDRLEGRGG
ADVLRGMEGA DALFGGTGND LLLGGAGNDR LDGQWERDVL VGGAGNDILI GGGGADRFVF
AGNFGRDRIR DFSPDMEGEW IDLRGVGAIT GFGDLMANHL SEVNGHVVIE VGANRITLEG
ISSEMLTRDD FLF