| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3689 |
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| Symbol | yphD |
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| ID | 3722179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | + |
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| Start bp | 810357 |
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| End bp | 811361 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640073363 |
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| Product | ABC sugar transporter, inner membrane subunit |
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| Protein accession | YP_355200 |
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| Protein GI | 77465697 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.138978 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACCT ACACCGAGCG CCAGGCCGGC TCGCGGCTGG CCGACTTCAT CGGGGACCAT
GCGCAGGTCC TGTCGATCGC GCTGTTCTTC GCGCTCTGTC TGCTGTTCTT CGGCGCCATG
ACCACCACCT TCCTCACCTC GGGCAACCTG CTCAACGTGG TGCGACAGGC GGCGCCCATC
CTGATCGTGG CCGTGGCCAT GACCCTCGTC ATCACGACCG CCGGGATCGA CCTGTCGGTG
GGCTCGATGG TGGCGCTCAT CAACGCGCTC GCGGCCATCG TCATGGCAAG CGGGCTCGAC
TGGACCCTGA CCCTGCCGCT GATGCTGGTC GCCGGCGCGC TGATCGGCGG GATCCAGGGC
TGGTTCATCG CCTATCAGGG CATTCCGGCC TTCATCGTGA CGCTCGCAGG CCTCTCGATC
CTGCGCGGCT TCGCGCTCTA CCTGACCGAG GGCTATTCGA TCCCGATCCG CGACGCGGCG
GGCTTCTTCT GGCTCGGCCG CGGCGAGGTG CTGGGCTTCC CCGTGCCCGC CCTGATCGCG
ATCCTGATCG CCGTGCTGGG CTTCGTCGTC ATGCTGCGCA CCCAGTATGG CCGGCAGGTG
ATCGCCGTCG GCTCGAACAT GGAGGCCGCG CGCCGGGTGG GGATGCCCGC CAAGCGCGTG
CTGGCCTCGG TCTATGTCGT CTCGGGCGTG GCGAGCGCGG TGGCGGGCAT GCTGATCGCC
GCCCGCCTCG GCTCGGGCTC GTCCAACGCG GCACAGGGCT TCGAGCTGCA GGTGATCGCG
GCCGTCGTGC TGGGGGGCAC CTCGCTCATG GGCGGCAAGG CCTCGATGCT GGGCACCGTC
CTCGGCACCA TGACCATCGC CGTCATCGGC AACGGGCTGA TCCTCATGCA TATCTCGCCC
TTCTTCACCC AGATCGTCAC AGGCACCATC ATCCTCGTCG CCATCTGGAT GAACACGCGG
CTCTTCGATC GCCCCTGGCG CTTCGGACGG AGGAAACCGG CATGA
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| Protein sequence | MATYTERQAG SRLADFIGDH AQVLSIALFF ALCLLFFGAM TTTFLTSGNL LNVVRQAAPI
LIVAVAMTLV ITTAGIDLSV GSMVALINAL AAIVMASGLD WTLTLPLMLV AGALIGGIQG
WFIAYQGIPA FIVTLAGLSI LRGFALYLTE GYSIPIRDAA GFFWLGRGEV LGFPVPALIA
ILIAVLGFVV MLRTQYGRQV IAVGSNMEAA RRVGMPAKRV LASVYVVSGV ASAVAGMLIA
ARLGSGSSNA AQGFELQVIA AVVLGGTSLM GGKASMLGTV LGTMTIAVIG NGLILMHISP
FFTQIVTGTI ILVAIWMNTR LFDRPWRFGR RKPA
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