| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3553 |
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| Symbol | dnaE |
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| ID | 3721967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 643014 |
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| End bp | 646505 |
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| Gene Length | 3492 bp |
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| Protein Length | 1163 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640073217 |
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| Product | DNA polymerase III subunit alpha |
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| Protein accession | YP_355055 |
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| Protein GI | 77465552 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCGAACG CTCCCCGATT CATCCATCTG CGCGTCCATA CCGAATATTC GCTGCTCGAG
GGCGCGGTGC CGGTGAAGAA GCTGATCGGC CTCTGCACGG CCGCCGCCAT GCCCGCCGTG
GCGGTGACGG ATACCAATGC CATGTTCGCC GCGCTGGAAT TCTCGGTGCT GGCCAGCGGC
GCAGGGATCC AGCCCATCGT CGGTTGTCAG GTCTCGGTCG CCTACGAGAC GGCGGCGCTG
GGCGAGCGGC CGAAGCCGCC CGCGCCGGTC GTGCTGCTGG CCCAGACCGA AACGGGCTAC
GGCAACCTCA TGAAGCTCTC CTCCTGCCTC TATCTCGGCA AGGAGGGTGC GCTGCCGCAG
GTGACGCCGT CCGAACTCGA GCGGCATGCG GAGGGGCTGA TCTGCCTGAC CGGCGGGCCG
GACGGGCCGG TGGGCCGGCA TCTGCGCGAG GGGCAGCGGG CGAAGGCCGA GGCGCTGCTG
GGCCGCCTCG CCGCGATCTA TCCCGGGCGG CTCTATGTCG AGTTGCAGCG CCATCCGGGC
GAGGGCGGGC GGCTGACCGA GGCCGAGCGC GCGACCGAAC CCGGGCATGT CGAGCTGGCC
TATGCGATGG GCCTGCCGCT CGTGGCCACG AACGACGTCT ATTTTCCGAA GCCCGAGATG
TATGAGGCGC ACGATGCGCT GATCTGCATC GCCGAAGGGG CCTATGTCGA TCAGGTGGCG
CCGCGGCGGC GGCTCACGCC GCAGCATTAC TTCAAGTCCG AGGCCGAGAT GGTCGCGCTG
TTCGCCGACC TGCCCGAGGC GGTGGAGAAC ACCGTCGAGA TCGCGCGCCG CTGCGCCTTC
AAGGCGGCCA AGCGCCCGCC GATCCTGCCG CGCTTCGCCG ATGACGAGGT GGAGGAGCTG
CGGCGGCAGG CCAAGGAAGG GCTGGCCGCG CGCCTCGCCG TGATCCCCCA TGCGGCGCCC
GTCGAGGACT ATGAGGCGCG CCTCTCCTTC GAGCTCGGCA TCATCGAGCA GATGGGCTTT
CCGGGCTACT TCCTGATCGT GGCCGACTTC ATCAAGTGGG GGAAGGCCAA CGGCATCCCG
GTGGGACCGG GACGGGGGTC GGGCGCGGGC TCGCTCGTGG CCTATGCGCT GACGATCACC
GACCTCGACC CCTTGCGTTA CCAGCTTCTC TTCGAGCGGT TTCTGAACCC CGAGCGGGTG
TCGATGCCGG ACTTCGACAT CGACTTCTGC ATGGACCGGC GCGAGGAGGT GATCCGCTAC
GTCCAGGAGA AATACGGCCG CGACAAGGTG GGGCAGATCA TCACCTTCGG CGCGCTCCTC
TCGAAGGCCG CCGTCCGCGA CGTGGGGCGC GTCCTCCAGA TGCCCTACGG GCAGGTGGAC
CGGCTGTCGA AGATGATCCC GGTCGAGGGG GTGAAGCCCG TCTCGATCCA GAAGGCGCTG
GCCGACGAGC CGCGGCTGCG CGAGGCCGCG AAGACCGAGG AGGTGGTGAA GCGGCTTCTG
GACTACGGGA TGCAGATCGA GGGGCTTCTG CGCAACGCCT CGACCCATGC CGCGGGCGTG
GTGATCGGCG ACCGGCCGCT CGACGAGCTG GTGCCGCTCT ATCAGGATCC GCGCTCGGAC
ATGCCGGCTA CCCAGTTCAA CATGAAATGG GTGGAAGCCG CGGGGCTGGT GAAGTTCGAC
TTCCTCGGCC TCAAGACGCT GACGGTGATC CAGAACGCGA TCGATCTGAT CCGCGGCACG
GGGCGGCCCC TGCACATGGC TGCGGACGGG CGGGTGCTCT ACGATCCGCC GCCGGGAGCC
GAGAACGACA TCGGGCATAT CCCGCTCGAG GACAAGGCCA CCTACGAGCT CTATGCGCAG
GCCAAGACCG TGGCGGTGTT CCAGGTCGAA AGCTCGGGCA TGATGGATGC GCTGCGACGC
ATGAAGCCCA CCTGCATCGA GGATATCGTG GCGCTGGTGG CGCTTTACCG GCCGGGGCCG
ATGGAGAACA TCCCGGTCTA TTGCGAGGTG AAGCACGGGC TGCGCGATCT CGAGAGCCTG
CATCCGACCA TCGACCCGAT CCTGAAGGAG ACGCAGGGCA TCATCGTCTA TCAGGAACAG
GTGATGCAGA TCGCGCAGGT CATGGGGGGC TATACGCTCG GCGGCGCGGA CCTTCTGCGC
CGCGCCATGG GCAAGAAGAT CGCCGAAGAG ATGGCCAAGG AGCGCCCGAA GTTCATCGAA
GGCGCAAAGA AGACCCACGG AATCGACGCG AAGAAAGCCG GCGAAGTCTT CGACCTGCTT
GAGAAATTCG CGAACTACGG CTTCAACAAG TCCCACGCCG CCGCCTATGC GGTCGTGAGC
TACCAGACCG CCTGGCTGAA GGCGAACCAT CCGGTCGAGT TCATGGCCGC GGTGATGAAC
TGCGATATCC ACCTGACCGA CAAGCTCGCC GTCTACAAGC GCGAGGTGGA CAAGCTCGGC
ATCCGCACGG TGGCGCCCTG CGTGAACGCC TCGCTCGCCA CCTTCACGGT GCGCGACGGC
GCGGTGGTCT ATGCGCTCGG CGCGCTGAAG AATGTGGGTG TCGAGGCGAT GCGGCTCATC
GTCGAGGCCC GCGGCGACCG GCCCTTCGCC ACGCTCTTCG ACATGGCGCG GCGGGTGGAG
CTGAAGCGGA TCGGCAAGCG TCCTCTCGAG ATGCTGGCGC GCGCCGGGGC TTTCGACGCG
CTCGACCGCA ACCGTGCCCG GGTGTTCGAG GCGCTGGATG CGCTGGTGGC CTATTCCGCC
GCCATTCACG AAGCGCTAAA TTCGAGCCAG GTGTCGCTGT TCGGCGAAGC AGGGGCGGAC
ATCCCCGAGC CGCGGCTGCC GTCGCGCGAC GACTGGCTGC CGGTCGAGCG ACTGGCGCAG
GAGCATCAGG CGATCGGCTT CTATCTCTCG GGCCATCCGC TCGACGATTA CATGGGGGCG
CTGAAGCGGC GCAACGTCAC CACGCTTGCC GCGCTGACCG ATCTGGCGCA GCGGGGGCCC
ATGGTGGCCA AGCTCGCCGG TGCCGTCTCG TCGCGGCAGG AGAAGAAGTC GGCCAAGGGC
AACCGGTTCG CCTTCGTCCA GCTTTCGGAT CCGACGGGGC TCTACGAATG CACCGTCTTT
TCGGATGTGC TCGAGCAGGC GCGCGACCTG CTGGAGCCGG GCGGCCATGT GGTGCTGACC
GTCGAGGCCA CGCTCGAGGG CGACAGTCTG AAGCTCCTCG CCCGCGGGGT CTCGCCGATC
GATGCGGTGG CGGCCGATGC GGGCGCGATG AGCCTGCGCG TCCATCTCGA CCGTGCCGAG
GCCGCGGCCT CGGTGGCGGC GCTGCTGGCC CGTGCGCAGG GCCGCGCCCG GGCGCCGGTG
CGGATCTGCG TCCGCGATCC GTCGGGCGGG CAGGAGATCG ACATCGAGCT CGGTCAGGAT
TTCGCCGTCT CGCCGCAGAT CCGCAGCGCG CTCCGCGCCG TGCCGGGTGT GGAGATGGTC
GAGGAGATCT AG
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| Protein sequence | MSNAPRFIHL RVHTEYSLLE GAVPVKKLIG LCTAAAMPAV AVTDTNAMFA ALEFSVLASG
AGIQPIVGCQ VSVAYETAAL GERPKPPAPV VLLAQTETGY GNLMKLSSCL YLGKEGALPQ
VTPSELERHA EGLICLTGGP DGPVGRHLRE GQRAKAEALL GRLAAIYPGR LYVELQRHPG
EGGRLTEAER ATEPGHVELA YAMGLPLVAT NDVYFPKPEM YEAHDALICI AEGAYVDQVA
PRRRLTPQHY FKSEAEMVAL FADLPEAVEN TVEIARRCAF KAAKRPPILP RFADDEVEEL
RRQAKEGLAA RLAVIPHAAP VEDYEARLSF ELGIIEQMGF PGYFLIVADF IKWGKANGIP
VGPGRGSGAG SLVAYALTIT DLDPLRYQLL FERFLNPERV SMPDFDIDFC MDRREEVIRY
VQEKYGRDKV GQIITFGALL SKAAVRDVGR VLQMPYGQVD RLSKMIPVEG VKPVSIQKAL
ADEPRLREAA KTEEVVKRLL DYGMQIEGLL RNASTHAAGV VIGDRPLDEL VPLYQDPRSD
MPATQFNMKW VEAAGLVKFD FLGLKTLTVI QNAIDLIRGT GRPLHMAADG RVLYDPPPGA
ENDIGHIPLE DKATYELYAQ AKTVAVFQVE SSGMMDALRR MKPTCIEDIV ALVALYRPGP
MENIPVYCEV KHGLRDLESL HPTIDPILKE TQGIIVYQEQ VMQIAQVMGG YTLGGADLLR
RAMGKKIAEE MAKERPKFIE GAKKTHGIDA KKAGEVFDLL EKFANYGFNK SHAAAYAVVS
YQTAWLKANH PVEFMAAVMN CDIHLTDKLA VYKREVDKLG IRTVAPCVNA SLATFTVRDG
AVVYALGALK NVGVEAMRLI VEARGDRPFA TLFDMARRVE LKRIGKRPLE MLARAGAFDA
LDRNRARVFE ALDALVAYSA AIHEALNSSQ VSLFGEAGAD IPEPRLPSRD DWLPVERLAQ
EHQAIGFYLS GHPLDDYMGA LKRRNVTTLA ALTDLAQRGP MVAKLAGAVS SRQEKKSAKG
NRFAFVQLSD PTGLYECTVF SDVLEQARDL LEPGGHVVLT VEATLEGDSL KLLARGVSPI
DAVAADAGAM SLRVHLDRAE AAASVAALLA RAQGRARAPV RICVRDPSGG QEIDIELGQD
FAVSPQIRSA LRAVPGVEMV EEI
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