| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RSP_3372 |
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| Symbol | |
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| ID | 3722074 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodobacter sphaeroides 2.4.1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007494 |
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| Strand | - |
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| Start bp | 436444 |
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| End bp | 437583 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640073039 |
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| Product | TRAP-T family transporter periplasmic binding protein |
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| Protein accession | YP_354877 |
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| Protein GI | 77465374 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0789991 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGCTT TCGAGAAGAA AGCGGCGTAT TCGCGCCGCT CGTTCCTGCG CACCGGTGCC
TTGGCCGGGG GTGCGGCGGC GGGGTCTGTC CTGGCGGCTC CGGCCGTTCT GGCCCAAGCG
CCGCTGGTGA TGAAGATGCA GACATCCTGG CCTGCCTCGG ACATCTGGAT GGACTTCGCC
CGCGAATATG TCACGCGGGT CGAGGAGATG TCGGGCGGCA GGATCAAGGT GGACCTGCTG
CCGGCCGGGG CCGTGGTCGG CGCCTTCCAG GTGATGGATG CCGTGCATGA CGGTGTGATC
GACGCTTCGC ATTCGGTGTC GGCCTACTGG TACGGCAAGT CGAAGGCGGC CTCGTTCTTC
GGCACGGGCC CGGTCTTCGG CGGTTCGGCC ACCACGATGC TCGGCTGGTT CTATCAGGGC
GGCGGTCAGG ATCTCTACCG CGAGCTGACC CAGGATATTC TCGGAATGAA CATCGTGGGC
TTCTACGGCT TCCCGATGCC GGCCCAGCCC TTCGGCTGGT TCAAGACCGA GGTGAACGGC
GTCGCCGACA TCCAGGGCTT CAAATACCGG ACCGTGGGGC TGGCGGCCGA CCTGCTGCAG
GCGATGGGCA TGTCGGTGGC GCAGCTGCCC GGCGGCGAGA TCGTGCCGGC GATGGAGCGG
GGCGTGATCG ACGCCTTCGA GTTCAACAAC CCCTCGTCGG ACATGCGCTT CGGCGCGCAG
GACGTGGCGA AGAACTATTA TCTCTCCTCC TACCATCAGG CGTCCGAGAG CTTCGAATAT
ACGTTCAACC GCGATTTCTA CGAGGATCTG GATCCCGATC TGCAGGCGAT CCTGAAATAT
GCGGTGGAGG CGGCCTCGAC CTCGAACACG GCGCTGGCGC TGCGCCAGTA TTCGGCCGAT
CTCGCGACGC TCGCGGCCGA AAACGGGGTC GCGGTGCATC GGACCCCGAA GGATATCCTT
TCGGGCCAGC TCGAGGCGTG GGACAAGCTG ATCGTGGATC TCGAGGCCGA CGAGTTCTTC
AAGAAGGTCC TCGACAGCCA GCGCGCCTGG GTGGAGCAGG TAAGCTATTA CGAGCTGATG
AACGCGGCCG ACCTCGGGCT GGCCTACGAA CATCACTTCC CCGGCAAGCT CAAGCTCTGA
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| Protein sequence | MTAFEKKAAY SRRSFLRTGA LAGGAAAGSV LAAPAVLAQA PLVMKMQTSW PASDIWMDFA
REYVTRVEEM SGGRIKVDLL PAGAVVGAFQ VMDAVHDGVI DASHSVSAYW YGKSKAASFF
GTGPVFGGSA TTMLGWFYQG GGQDLYRELT QDILGMNIVG FYGFPMPAQP FGWFKTEVNG
VADIQGFKYR TVGLAADLLQ AMGMSVAQLP GGEIVPAMER GVIDAFEFNN PSSDMRFGAQ
DVAKNYYLSS YHQASESFEY TFNRDFYEDL DPDLQAILKY AVEAASTSNT ALALRQYSAD
LATLAAENGV AVHRTPKDIL SGQLEAWDKL IVDLEADEFF KKVLDSQRAW VEQVSYYELM
NAADLGLAYE HHFPGKLKL
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